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. 2018 Jun 11;145(11):1483–1492. doi: 10.1017/S003118201800063X

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© Crown Copyright and Cambridge University Press 2018

This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted re-use, distribution, and reproduction in any medium, provided the original work is properly cited.

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Fig. 3. — Maximum Likelihood (ML) phylogeny of IGS rDNA sequence types from GenBank and generated by this study. 366 positions were analysed. 68 IGS reads were reduced to the 27 sequences represented in this tree by not including identical reads and minor-variant singleton sequences in the analysis. Maximum Likelihood bootstrap supports are shown at each node. Blobs indicate BPP = 1.0. The tree is rooted on M. cochillia. O-type (Marteilia refringens) sequences are labeled in the larger clade; all other sequences are (paraphyletic) M-type (M. pararefringens).