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. 2018 Aug 7;94(11):fiy149. doi: 10.1093/femsec/fiy149

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© FEMS 2018.

This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs licence (http://creativecommons.org/licenses/by-nc-nd/4.0/), which permits non-commercial reproduction and distribution of the work, in any medium, provided the original work is not altered or transformed in any way, and that the work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Figure 3. — (A) Acquired antibiotic-resistance genes and chromosomal point mutation identified in drain water and chive E. coli ST1056 using CSI Phylogeny. Note that all results were identical for both strains. Identity: % identical bases between query sequence and E. coli ST1056 sequence; query/HSP: query sequence length compared to alignment length; contig: location of detected resistance gene or chromosomal point mutation; PMID: PubMed ID; n.a., not applicable; chrom., chromosome. (B) Plasmid characteristics determined by PlasmidFinder, pMLST and RAST. pC142 and pC158 are the plasmids from drain and chive isolate, respectively.