Table 5.
Most antigenic T-helper epitopes predicted by NetMHCIIpan 3.0.
| Core Epitope | Length | From | To | IC50 | Restricted Allele | Peptide |
|---|---|---|---|---|---|---|
| IRIQLRSQC | 9 | 25 | 33 | 5.91 | HLA-DRB1*12:01 | RQKKIRIQLRSQCAT |
| ILHLGSRQK | 9 | 15 | 23 | 6.26 | HLA-DRB5*01:01 | KVGILHLGSRQKKIR |
| INLDLGSGV | 9 | 50 | 58 | 54.38 | HLA-DRB1*13:02 | GINLDLGSGVKVKII |
| LRSQCATWK | 9 | 29 | 37 | 84.35 | HLA-DRB1*11:01 | IRIQLRSQCATWKVI |
| LDLGSGVKV | 9 | 52 | 60 | 100.79 | HLA-DRB1*07:01 | GINLDLGSGVKVKII |
| RIQLRSQCA | 9 | 26 | 34 | 210.77 | H LA-DRB1*04:05 | KIRIQLRSQCATWKV |
| GILHLGSRQ | 9 | 14 | 22 | 329.88 | HLA-DRB1*09:01 | LKVGILHLGSRQKKI |
| QLKVGILHL | 9 | 10 | 18 | 421.45 | HLA-DRB1*15:01 | KNQQLKVGILHLGSR |
| KKIRIQLRS | 9 | 23 | 31 | 698.29 | HLA-DRB1*08:02 | CATWKVICKSCISQT |
| KIRIQLRSQ | 9 | 24 | 32 | 1547.88 | HLA-DRB1*03:01 | LGSRQKKIRIQLRSQ |