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. Author manuscript; available in PMC: 2018 Sep 15.
Published in final edited form as: Pancreatology. 2017 Nov 14;18(1):46–53. doi: 10.1016/j.pan.2017.11.006

Table 1.

RNASseq RPKM values from laser captured microdissected human pancreatic adenocarcinoma cancers and patient-matched normal pancreatic acinar tissue or normal pancreatic ducts.

Gene Function Tumor
n = 16
Normal
duct
n = 16
Tumor /
Normal
duct
Tumor
n = 5
Normal
acinar
n = 5
Tumor /
Normal
acinar
p-value
(paired
t-test)
Genes for pyruvate uptake and metabolism to lactate
SLC2A1
 (GLUT1)
PM glucose transporter 97.09 12.75 7.61 76.10 0.41 184.05 < 0.0001
HK2 Hexokinase II 32.67 8.11 4.03 68.15 0.77 89.01 < 0.0001
SLC16A1
 (MCT1)
PM pyruvate/lactate transporter 12.38 4.46 2.78 24.83 1.29 19.26 < 0.0001
SLC16A3
 (MCT4)
PM pyruvate/lactate transporter 21.27 7.85 2.71 5.53 0.05 113.47 < 0.0001
LDHA Lactate dehydrogenase A 351.6 142.31 2.47 305.27 20.67 14.77 < 0.0001
FOXM1 LDHA-activating transcription factor 6.17 1.45 4.27 2.21 0.12 18.40 0.0004

Other competing pyruvate metabolic pathway genes
BRP44L Inner mito. Membrane pyruvate carrier 26.05 29.48 0.88 14.37 10.63 1.35 0.34
GPT2 Glutamate-pyruvate transaminase 7.79 12.57 0.62 8.21 32.91 0.25 0.0015
PDHA1 Mitochondrial pyruvate dehydrogenase 17.86 16.61 1.08 19.29 16.58 1.16 0.1585
PDHP Mitochondrial pyruvate dehydrogenase 35.88 36.23 0.99 28.75 16.60 1.73 0.4035

Aerobic glycolysis genes are highly upregulated in pancreatic cancer. Other competing pyruvate metabolic pathway genes are downregulated or largely unchanged. RPKM: average reads per kilobase per million reads. PM: plasma membrane.