Table 1.
Gene | Function | Tumor n = 16 |
Normal duct n = 16 |
Tumor / Normal duct |
Tumor n = 5 |
Normal acinar n = 5 |
Tumor / Normal acinar |
p-value (paired t-test) |
---|---|---|---|---|---|---|---|---|
Genes for pyruvate uptake and metabolism to lactate | ||||||||
SLC2A1 (GLUT1) |
PM glucose transporter | 97.09 | 12.75 | 7.61 | 76.10 | 0.41 | 184.05 | < 0.0001 |
HK2 | Hexokinase II | 32.67 | 8.11 | 4.03 | 68.15 | 0.77 | 89.01 | < 0.0001 |
SLC16A1 (MCT1) |
PM pyruvate/lactate transporter | 12.38 | 4.46 | 2.78 | 24.83 | 1.29 | 19.26 | < 0.0001 |
SLC16A3 (MCT4) |
PM pyruvate/lactate transporter | 21.27 | 7.85 | 2.71 | 5.53 | 0.05 | 113.47 | < 0.0001 |
LDHA | Lactate dehydrogenase A | 351.6 | 142.31 | 2.47 | 305.27 | 20.67 | 14.77 | < 0.0001 |
FOXM1 | LDHA-activating transcription factor | 6.17 | 1.45 | 4.27 | 2.21 | 0.12 | 18.40 | 0.0004 |
Other competing pyruvate metabolic pathway genes | ||||||||
BRP44L | Inner mito. Membrane pyruvate carrier | 26.05 | 29.48 | 0.88 | 14.37 | 10.63 | 1.35 | 0.34 |
GPT2 | Glutamate-pyruvate transaminase | 7.79 | 12.57 | 0.62 | 8.21 | 32.91 | 0.25 | 0.0015 |
PDHA1 | Mitochondrial pyruvate dehydrogenase | 17.86 | 16.61 | 1.08 | 19.29 | 16.58 | 1.16 | 0.1585 |
PDHP | Mitochondrial pyruvate dehydrogenase | 35.88 | 36.23 | 0.99 | 28.75 | 16.60 | 1.73 | 0.4035 |
Aerobic glycolysis genes are highly upregulated in pancreatic cancer. Other competing pyruvate metabolic pathway genes are downregulated or largely unchanged. RPKM: average reads per kilobase per million reads. PM: plasma membrane.