Table 1.
Rhesus monkey brain libraries with known sex
| Study | Library ID | Sample Type | Aligned Reads, M | XIST FPKM | RPS4Y1 FPKM | RPS4Y2 FPKM | CountHet | SNPs w/≥10 Reads, n |
|---|---|---|---|---|---|---|---|---|
| GSE85377 | SRR4015393 | F CC | 30.54 | 43.7 | 0.0 | 0.1 | 10 | 25 |
| SRR4015394 | M CC | 43.69 | 0.0 | 271.5 | 113.1 | 25 | ||
| SRR4015395 | F CC | 41.12 | 52.2 | 0.3 | 0.1 | 13 | 25 | |
| SRR4015396 | M CC | 39.54 | 0.0 | 230.4 | 107.4 | 25 | ||
| SRR4015397 | F CC | 35.16 | 35.8 | 0.2 | 0.0 | 8 | 25 | |
| SRR4015398 | M CC | 40.26 | 0.0 | 243.6 | 109.5 | 25 | ||
| SRR4015399 | F CC | 36.81 | 33.9 | 0.0 | 0.1 | 7 | 25 | |
| SRR4015400 | M CC | 37.17 | 0.0 | 228.5 | 112.9 | 25 | ||
| SRR4187444 | M OC | 47.82 | 0.0 | 159.4 | 68.6 | 25 | ||
| SRR4187445 | F OC | 47.03 | 18.6 | 0.0 | 0.0 | 10 | 25 | |
| SRR4187446 | F OC | 40.38 | 16.5 | 0.0 | 0.1 | 12 | 25 | |
| SRR4187447 | M OC | 39.32 | 0.0 | 218.8 | 82.3 | 25 | ||
| SRR4187448 | F OC | 41.39 | 22.1 | 0.0 | 0.1 | 7 | 25 | |
| SRR4187449 | M OC | 31.98 | 0.0 | 212.7 | 88.0 | 25 | ||
| SRR4187450 | F OC | 51.03 | 19.6 | 0.0 | 0.0 | 7 | 25 | |
| SRR4187451 | M OC | 43.82 | 0.0 | 216.4 | 88.1 | 25 | ||
| GSE96731 | SRR5351411 | M CA 32 | 8.08 | 0.0 | 78.9 | 38.7 | 23 | |
| SRR5351412 | M CA 32 | 9.01 | 0.0 | 78.5 | 37.8 | 20 | ||
| SRR5351413 | M CA 32 | 9.42 | 0.0 | 39.7 | 18.3 | 17 | ||
| SRR5351414 | M CA 32 | 7.64 | 0.0 | 46.5 | 26.9 | 17 | ||
| SRR5351415 | M CA 32 | 7.80 | 0.0 | 67.1 | 39.1 | 21 | ||
| SRR5351416 | M CA 32 | 9.15 | 0.0 | 39.1 | 21.7 | 13 | ||
| SRR5351417 | M CA 32 | 7.55 | 0.0 | 41.2 | 20.0 | 15 | ||
| SRR5351418 | M CA 32 | 9.15 | 0.0 | 70.8 | 32.6 | 21 |
FPKM, fragments per kilobase of transcript per million mapped reads SNP, single nucleotide polymorphism; F, female; M, male; Sample type: cingulate cortex (CC), occipital cortex (OC), hippocampus (CA).