Table 1.
Corresponding SVA_D subfamilies in gorilla, chimpanzee and human
| Gorilla | Chimpanzee | Human | Observations |
|---|---|---|---|
| gg_SVA_D1 | pt_SVA_D1 | hs_SVA_D1 | |
| gg_SVA_D2a | |||
| gg_SVA_D2b | |||
| pt_SVA_D2a | hs_SVA_D2a | ||
| pt_SVA_D2b | hs_SVA_D2b | 1 species-specific substitution each | |
| gg_SVA_DR | pt_SVA_DR | hs_SVA_DR | |
| gg_SVA_DRa | hs_SVA_D9 | ||
| gg_SVA_DRb | shared substitutions with SVA_E | ||
| gg_SVA_DRc | hs_SVA_DRb | 2 species-specific substitutions in hs | |
| gg_SVA_D3 | |||
| gg_SVA_D3a | hs_SVA_D7 | 3 species-specific substitutions in hs | |
| gg_SVA_D3b | |||
| gg_SVA_D3c | |||
| gg_SVA_D4 | pt_SVA_D5a | hs_SVA_D6b | 1 species-specific substitution each; identical in hs&pt |
| gg_SVA_D4a-h | |||
| gg_SVA_D5a-c | |||
| pt_SVA_DRa | hs_SVA_DRa | ||
| pt_SVA_DRb | hs_SVA_Fa | 2 species-specific substitution in pt; 1 in hs | |
| pt_SVA_DRc | hs_SVA_D5a | 2 species-specific substitution in pt; 1 in hs | |
| pt_SVA_DRd | hs_SVA_D4 | 1 species-specific substitution in hs | |
| pt_SVA_D3 | hs_SVA_D3 | ||
| pt_SVA_D4a/b | see Fig. 3c | ||
| pt_SVA_D4c | hs_SVA_D6f | ||
| pt_SVA_D5b/c | see Fig. 3c | ||
| pt_SVA_D6 | |||
| hs_SVA_DRc | |||
| hs_SVA_D4a | |||
| hs_SVA_D5 | small number of elements in pt | ||
| hs_SVA_D5b | |||
| hs_SVA_D6a, c, d, e | see Fig. 3c | ||
| hs_SVA_D8 |
Subfamilies listed in a single column are species-specific. Species-specific substitutions in the last column refer to substitutions present in addition to those shared across species. gg gorilla, pt chimpanzee, hs human