Subject area | Biology |
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More specific subject area | Gene expression |
Type of data | Tables |
How data was acquired | Gene expression extracted from RNA-seq was downloaded from TANRIC and TCGA database. |
Data format | Analyzed |
Experimental factors | The expression of lncRNA and protein-coding genes were extracted from the total expression profiles. |
Experimental features | Position conservation analysis was conducted on lncRNAs across ten vertebrate species to find lncRNAs conserved by position. Co-expression and causal inference test were used to infer causal relationship between lncRNA and their adjacent TF genes. |
Data source location | N/A |
Data accessibility | With this article |
Related research article | Systematic analysis reveals long noncoding RNAs regulating neighboring transcription factors in human cancers. BBA molecular basis of disease. (In press) |