Table 1.
Summary Statistics of the Pirarucu Genome
| Sequencing Information | |
|---|---|
| Library insert size (bp) | 400–500 |
| Read length (bp) | 2×250 |
| Total raw bases sequenced (Gb) | 103.01 |
| Total filtered bases sequenced (Gb) | 76.91 |
| Genome Features | |
| Assembled genome size (Mb) | 661.28 |
| # scaffolds | 5,301 |
| Scaffold N50 (kb) | 668 |
| Contig N50 (kb) | 51.23 |
| Largest scaffold (bp) | 5,332,704 |
| GC (%) | 43.18 |
| Repeat content (% of genome) | 21.69 |
| Genome Annotation | |
| Protein-coding gene number | 24,655 |
| % of genome covered by genes | 33.9 |
| Mean transcript length (bp) | 9,150 |
| Mean exons per gene | 9 |
| Mean CDS length (bp) | 1,603 |
| Mean exon length (bp) | 174 |
| Mean intron length (bp) | 920 |