Table 3.
Comparison of Sex-Specific Genome Assemblies
| Genome Features | Arapaima gigas (female) | Arapaima gigas (male) |
|---|---|---|
| Assembled genome size (Mb) | 660.71 | 660.43 |
| Genome fraction (%) | 99.74 | 99.73 |
| # scaffolds | 8,324 | 6,058 |
| Scaffold N50 (kb) | 295 | 471 |
| Contig N50 (kb) | 40.75 | 35.19 |
| Largest scaffold (bp) | 2,179,931 | 2,199,363 |
| Largest alignment to the reference (bp) | 2,178,748 | 1,935,564 |
| GC (%) | 43.18 | 43.18 |
| # misassemblies | 2,041 | 2,342 |
| # complete genes | 19,737 | 19,540 |
| # partial genes | 5,076 | 5,274 |
| Number of sex-specific bases in assembly (bp) | 103,749 (0.0157%) | 64,323 (0.0097%) |
| Longest sex-specific sequence length (bp) | 2,881 | 1,658 |