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. 2018 Sep 18;7:e37138. doi: 10.7554/eLife.37138

Key resources table.

Reagent type (species)
or resource
Designation Source or reference Identifiers Additional
information
Strain, strain
background (E. coli)
S17-1 lambda pir PMID_6340113 thi pro hdsR hdsM + recA,
chromosomal
insertion of
RP4-2(Tc::Mu Km::Tn7),
AmpS
Strain, strain
background (E. coli)
BL21 Rosetta (DE3) Novagen F- ompT hsdSB(rB- mB-)
gal dcm (DE3)
pRARE (CamR)
Strain, strain
background
(Bacteroides
thetaiotaomicron)
VPI-5482 ∆tdk PMID_18611383
Strain, strain
background
(B. thetaiotaomicron)
VPI-5482 ∆tdk ∆locus1 ∆locus3 PMID_24439897
Strain, strain
background
(B. thetaiotaomicron)
VPI-5482 ∆tdk ∆locus1 ∆btuG2 ∆locus3 This paper
Strain, strain
background
(B. thetaiotaomicron)
VPI-5482 ∆tdk ∆locus1 ∆btuB2 ∆locus3 PMID_24439897
Strain, strain
background
(B. thetaiotaomicron)
VPI-5482 ∆tdk ∆locus1 ∆locus2 ∆locus3 PMID_24439897
Strain, strain
background
(B. thetaiotaomicron)
VPI-5482 ∆tdk ∆locus1 ∆locus3 att::pNBU2_tet_BC01 This paper
Strain, strain
background
(B. thetaiotaomicron)
VPI-5482 ∆tdk ∆locus1 ∆btuG2 ∆locus3 att::pNBU2_tet_BC14 This paper
Strain, strain
background
(B. thetaiotaomicron)
VPI-5482 ∆tdk ∆locus1 ∆btuB2 ∆locus3 att::pNBU2_tet_BC14 This paper
Strain, strain
background
(B. thetaiotaomicron)
VPI-5482 ∆tdk ∆locus1 ∆btuG2 ∆locus3 att::pNBU2_tet_BC16_us1957_btuG2 This paper
Strain, strain
background (E. coli)
BL21 Rosetta (DE3)
pET21_NESG_btuG2
This paper
Strain, strain
background (E. coli)
BL21 Rosetta (DE3) pET21_NESG_btuG2_10xHis This paper
Strain, strain
background (E. coli)
BL21 Rosetta (DE3) pET21_NESG_BVU2056 This paper
Strain, strain
background (E. coli)
BL21 Rosetta (DE3) pET21_NESG_BACUNI04578 This paper
Strain, strain
background (E. coli)
BL21 Rosetta (DE3) pET21_NESG_BACCOPRO02032 This paper
Recombinant
DNA reagent
pExchange-tdk PMID: 18611383 plasmid
Recombinant
DNA reagent
pExchange_tdk_∆btuG2 plasmid
Recombinant
DNA reagent
pNBU2_ermG PMID: 18611383 plasmid
Recombinant
DNA reagent
pNBU2_ermG_us1957 This paper plasmid
Recombinant
DNA reagent
pNBU2_tet_BC01 PMID: 18996345 plasmid
Recombinant
DNA reagent
pNBU2_tet_BC14 PMID: 18996345 plasmid
Recombinant
DNA reagent
pNBU2_tet_BC16 PMID: 24439897 plasmid
Recombinant
DNA reagent
pNBU2_erm_us1957_btuG2_C32A This paper plasmid
Recombinant
DNA reagent
pNBU2_erm_us1957_btuG2_∆ss This paper plasmid
Recombinant
DNA reagent
pNBU2_erm_us1957
_btuG2_K34A W35A D36A
This paper plasmid
Recombinant
DNA reagent
pNBU2_erm_us1957_btuG2_susD-ss This paper plasmid
Recombinant
DNA reagent
pNBU2_erm_us1957_btuG2_susD-ss-LES This paper plasmid
Recombinant
DNA reagent
pNBU2_erm_us1957_btuB2_FLAG_HA This paper plasmid
Recombinant
DNA reagent
pNBU2_erm_us1957
_BT1763_FLAG_HA
This paper plasmid
Recombinant
DNA reagent
pNBU2_erm_us1957
_BT3704_HA
This paper plasmid
Recombinant
DNA reagent
pET21_NESG_btuG2 Northeast
Structural Genomics
Consortium; PDB 3DSM
plasmid
Recombinant
DNA reagent
pET21_NESG_btuG2_10xHis This paper plasmid
Recombinant
DNA reagent
pET21_NESG_BVU2056 This paper plasmid
Recombinant
DNA reagent
pET21_NESG_
BACUNI04578
This paper plasmid
Recombinant
DNA reagent
pET21_NESG_
BACCOPRO02032
This paper plasmid