Table 4.
Number of differentially expressed genes (duplicate probe identifiers removed) shared between each laboratory using its own method of normalization and analysis methods for all genes that were identified as different (post hoc corrected)
| Shared differentially expressed genes | ||||||
|---|---|---|---|---|---|---|
| Laboratorya | 1 | 2 | 3b | 4 | 5 | 6 |
| 1 (5064) | X | |||||
| 2 (6152) | 4040 | X | ||||
| 3b (6361) | 2027 | 2426 | X | |||
| 4 (2196) | 1863 | 1999 | 927 | X | ||
| 5 (4324) | 2551 | 2822 | 1918 | 1305 | X | |
| 6 (5744) | 3443 | 3830 | 2172 | 1852 | 2378 | X |
a
Total number of differentially expressed genes (given in parentheses).
b
Non–false discovery rate data used.
X
indicates 100% as data identical.