Table 1:
Summary statistics of generated whole-genome shotgun sequencing data
| Platform | Library type | Mean insert size (kb) | Mean read length (bp) | Number of reads | Number of bases (Gb) |
|---|---|---|---|---|---|
| HiSeqX (raw) | Paired-end | 0.35 | 147.7 | 1857,762 ,090 | 282.92 |
| HiSeqX (filtered) | 140.6 | 1,205,616,705 | 169.47 | ||
| PacBio RS II | SMRTbell | 15–50 | 8,852 | 2,794,391 | 24.736 |
| PacBio RS II | SMRTbell | 15–50 | 9,085 | 595,447 | 5.409 |
| PacBio RS II | SMRTbell | 15–50 | 10,432 | 1,867,543 | 19.482 |
| PacBio RS II | SMRTbell | 20–50 | 10,834 | 2,487,852 | 26.952 |
| PacBio Total | 9,887 | 7,745 ,233 | 76.58 | ||
| PacBio Unique a | 10 987 | 6,167,714 | 67.77 |
Bold rows indicate data used for assembly.
a
Longest read per sequenced molecule (single-molecule real-time zero-mode waveguide- ZMW).