Table 1.
Summary of the data deposited in PalmXplore system
| P5-build oil palm genome statistics | |||
|---|---|---|---|
| Total number of scaffolds | 40 360 | ||
| Average / N50 / largest scaffold sizes (bp) | 38 036 / 1 045 414 / 22 100 610 | ||
| Number of bases (bp) | 1 535 150 282 | ||
| Oil palm gene models | |||
| Representative | Fgenesh++ | Seqping | |
| Number of genes | 26 059 | 27 915 | 17 680 |
| Average length (bp) | 1 239 | 1 120 | 1 193 |
| Gene density (gene/Mb) | 16.98 | 18.19 | 11.52 |
| Average exon per gene | 5.4 | 5.1 | 6.0 |
| Average exon length (bp) | 252 | 237 | 197 |
| Number of genes annotated to GO term(s) | 21 572 | - | - |
| Number of genes with Enzyme Code (KEGG) | 6 195 | - | - |
| Others | |||
| Intronless genes | 3 658 | ||
| Resistance (R) genes | 210 | ||
| FAB genes | 42 | ||