TABLE 1.
Introduction | Host(s) | State(s) or province | Yr | Isolate name | Sample date (yr-mo-day) | Subtype |
---|---|---|---|---|---|---|
BYP-MI-2015(H5N2) | Mallard | Michigan | 2015 | A/mallard/Michigan/15-031493-1orig/2015 | 2015-10-01 | H5N2 |
BYP-OR-2006(H5N2) | Duck, guinea fowl | Oregon | 2006 | A/duck/Oregon/459674-3/2006 | 2006-09-29 | H5N2 |
A/guineafowl/Oregon/459674-5/2006 | 2006-09-29 | H5N2 | ||||
GBP-CA-2014(H5N8) | Quail | California | 2014 | A/quail/California/K1400794/2014 | 2014-04 | H5N8 |
GBP-ID-2008(H5N8) | Pheasant | Idaho | 2008 | A/pheasant/Idaho/08-002590-63/2008 | 2008 | H5N8 |
CPF-WI-2017(H5N2) | Turkey | Wisconsin | 2017 | A/turkey/Wisconsin/17-007146-1/2017 | 2017-03-02 | H5N2 |
A/turkey/Wisconsin/17-007146-2/2017 | 2017-03-02 | H5N2 | ||||
A/turkey/Wisconsin/17-007146-3/2017 | 2017-03-02 | H5N2 | ||||
A/turkey/Wisconsin/17-007319-3/2017 | 2017-03-03 | H5N2 | ||||
A/turkey/Wisconsin/17-007981-6/2017 | 2017-03-09 | H5N2 | ||||
CPF-MO-2016(H5N1) | Turkey | Missouri | 2016 | A/turkey/Missouri/16-014037-7/2016 | 2016-04-29 | H5N1 |
CPF-MB-2010(H5N2) | Turkey | Manitoba | 2010 | A/turkey/MB/FAV11/2010 | 2010-11-25 | H5N2 |
A/turkey/MB/FAV10/2010 | 2010-11-26 | H5N2 | ||||
CPF-VA-2007(H5N1) | Turkey | Virginia | 2007 | A/turkey/VA/505477-18/2007 | 2007-07-11 | H5N1 |
A/turkey/Virginia/505477-17/2007 | 2007-07-11 | H5N1 | ||||
CPF-CA-2002(H5N2) | Turkey | California | 2002 | A/turkey/CA/D0208651-C/02 | 2002 | H5N2 |
LBM-NY-2016(H5N2) | Duck, muscovy duck | Ontario, New York, New Jersey | 2016 | A/domesticduck/ON/FAV-18CS46/2016 | 2016 | H5N2 |
A/duck/NewYork/16-020978-2orig/2016 | 2016 | H5N2 | ||||
A/duck/NewYork/16-021467-1orig/2016 | 2016 | H5N2 | ||||
A/duck/NewYork/16-021916-1orig/2016 | 2016 | H5N2 | ||||
A/duck/NewYork/16-021920-1orig/2016 | 2016 | H5N2 | ||||
A/muscovyduck/NewJersey/16-021456-4/2016 | 2016 | H5N2 | ||||
A/muscovyduck/NewJersey/16-021457-2/2016 | 2016 | H5N2 | ||||
LBM-NJ-2015(H5N1) | Chicken | New Jersey | 2015 | A/chicken/New_Jersey/15_002659_2/2015 | 2015-01-20 | H5N1 |
LBM-NJ-2011(H5N2) | Duck | New Jersey | 2011 | A/duck/NewJersey/11-064045-002/2011 | 2011-12-20 | H5N2 |
LBM-NY-2007(H5N2) | Duck, muscovy duck | New York | 2007-2009 | A/duck/NewYork/07-002127-001/2007 | 2007-10-30 | H5N2 |
A/muscovyduck/NewYork/08-000560-002/2008 | 2008-03-13 | H5N2 | ||||
A/duck/NewYork/08-000759-001/2008 | 2008-04-22 | H5N2 | ||||
A/duck/NewYork/08-000937-001/2008 | 2008-05-22 | H5N2 | ||||
A/muscovyduck/NewYork/09-002670-002/2009 | 2009-03-04 | H5N2 | ||||
A/duck/NewYork/09-005059-001/2009 | 2009-04-14 | H5N2 | ||||
A/muscovyduck/NewYork/09-005059-002/2009 | 2009-04-14 | H5N2 | ||||
LBM-PA-2007(H5N2) | Chicken, duck, guinea fowl, muscovy duck, pheasant | Pennsylvania, New York, New Jersey | 2007-2008 | A/duck/Pennsylvania/07-002198-003/2007 | 2007-11-09 | H5N2 |
A/muscovyduck/NewJersey/07-002376-001/2007 | 2007-12-05 | H5N2 | ||||
A/guineafowl/NewYork/08-000170-003/2008 | 2008-01-07 | H5N2 | ||||
A/pheasant/NewYork/08-000170-002/2008 | 2008-01-07 | H5N2 | ||||
A/guineafowl/NewYork/08-000238-001/2008 | 2008-01-28 | H5N2 | ||||
A/chicken/NewJersey/251-4/2008 | 2008-02-01 | H5N2 | ||||
A/chicken/NewJersey/577-6/2008 | 2008-03-27 | H5N2 | ||||
A/chicken/NewJersey/08-000640-006/2008 | 2008-04-03 | H5N2 | ||||
A/guineafowl/NewJersey/08-000640-008/2008 | 2008-04-03 | H5N2 | ||||
A/guineafowl/NewJersey/08-000841-001/2008 | 2008-05-14 | H5N2 | ||||
A/muscovyduck/NewJersey/08-000912-001/2008 | 2008-05-28 | H5N2 | ||||
LBM-NY-2006(H5N2) | Duck, quail, turkey | New York, Pennsylvania | 2006-2007 | A/duck/NewYork/465571/2006 | 2006-10-23 | H5N2 |
A/duck/NewYork/465976/2006 | 2006-10-24 | H5N2 | ||||
A/duck/NewYork/466787/2006 | 2006-10-31 | H5N2 | ||||
A/turkey/NewYork/465977/2006 | 2006-10-31 | H5N2 | ||||
A/duck/NewYork/470179/2006 | 2006-11-07 | H5N2 | ||||
A/avian/NewYork/466812/2006 | 2006-11-09 | H5N2 | ||||
A/duck/Pennsylvania/07-467189-1/2006 | 2006-11-09 | Mixed | ||||
A/duck/NewYork/469961/2006 | 2006-11-13 | H5N2 | ||||
A/duck/NewYork/489761/2007 | 2007 | H5N2 | ||||
A/duck/NewYork/481172/2007 | 2007-01-23 | H5N2 | ||||
A/duck/NewYork/483239/2007 | 2007-02-02 | H5N2 | ||||
A/duck/NewYork/484057/2007 | 2007-02-06 | H5N2 | ||||
A/duck/NewYork/484680/2007 | 2007-02-12 | H5N2 | ||||
A/duck/NewYork/490722/2007 | 2007-03-21 | H5N2 | ||||
A/duck/NewYork/492652/2007 | 2007-04-05 | H5N2 | ||||
A/duck/NewYork/494165/2007 | 2007-04-18 | H5N2 | ||||
A/quail/NewYork/07-501360-1/2007 | 2007-06-02 | H5N2 | ||||
A/quail/NewYork/501360/2007 | 2007-06-12 | H5N2 | ||||
A/duck/NewYork/504371/2007 | 2007-06-22 | H5N2 | ||||
A/duck/NewYork/504372/2007 | 2007-06-22 | H5N2 | ||||
LBM-NJ-2006(H5N2)a | Chicken, duck, muscovy duck | New York, New Jersey, Pennsylvania | 2006 | A/avian/NewJersey/437109/2006 | 2006-05-09 | H5N2 |
A/chicken/NewYork/439236/2006 | 2006-05-10 | H5N2 | ||||
A/chicken/NewYork/439235/2006 | 2006-05-15 | H5N2 | ||||
A/muscovyduck/NewYork/62095-1/2006 | 2006-05-15 | H5N2 | ||||
A/duck/NewYork/440410/2006 | 2006-05-17 | H5N2 | ||||
A/duck/NewYork/440409/2006 | 2006-05-23 | H5N2 | ||||
A/duck/NewYork/445743/2006 | 2006-06-19 | H5N2 | ||||
A/chicken/Pennsylvania/446080-7/2006 | 2006-07 | H5N2 | ||||
A/duck/Pennsylvania/446080-6/2006 | 2006-07 | H5N2 | ||||
A/duck/Pennsylvania/446080-7/2006 | 2006-07 | H5N2 | ||||
LBM-NJ-2006(H5N2)b | Guinea fowl | New York, New Jersey | 2006-2007 | A/avian/NewYork/448534/2006 | 2006 | H5N2 |
A/guineafowl/NewJersey/447114/2006 | 2006-07-19 | H5N2 | ||||
A/guineafowl/NewJersey/07-002030-001/2007 | 2007-10-23 | H5N2 | ||||
LBM-NJ-2001(H5N2) | Duck | Maine, New Jersey | 2001–2002 | A/duck/NJ/117228-7/2001 | 2001-07-16 | H5N2 |
A/duck/ME/151895-7A/2002 | 2002-01-29 | H5N2 |
An isolate is defined as an avian influenza virus recovered from wild birds or domestic poultry. An introduction describes a case of avian influenza infection detected in domestic poultry, and one or multiple isolates can be recovered from the same introduction.