Table 2.
Summary of the Drosophila melanogaster RNA-seq Libraries Obtained from GEO: GSE18068
| Accession number | Name | Reads | Reads Mapping to the Genome | % |
|---|---|---|---|---|
| SRR030232 | E0-4_1 | 3,433,652 | 3,292,953 | 95.90 |
| SRR030233 | E0-4_2 | 4,093,252 | 3,989,272 | 97.46 |
| SRR030238 | E4-8_1 | 2,822,374 | 2,658,024 | 94.18 |
| SRR030239 | E4-8_2 | 3,800,699 | 3,689,337 | 97.07 |
| SRR030236 | E8-12_1 | 5,197,055 | 4,947,643 | 95.20 |
| SRR030237 | E8-12_2 | 5,146,028 | 4,958,807 | 96.36 |
| SRR030226 | E12-16_1 | 4,908,119 | 4,665,060 | 95.05 |
| SRR030227 | E12-16_2 | 3,829,586 | 3,705,026 | 96.75 |
| SRR030234 | E16-20_1 | 9,322,851 | 8,456,435 | 90.71 |
| SRR030235 | E16-20_2 | 6,222,965 | 5,676,767 | 91.22 |
| SRR030240 | E20-24_1 | 3,488,824 | 3,236,901 | 92.78 |
| SRR030241 | E20-24_2 | 5,442,437 | 5,200,659 | 95.56 |
| SRR030242 | L1_1 | 9,611,846 | 8,992,150 | 93.55 |
| SRR030243 | L1_2 | 6,504,722 | 6,110,616 | 93.94 |
| SRR030248 | L2_1 | 9,327,073 | 8,888,182 | 95.29 |
| SRR030249 | L2_2 | 11,399,101 | 10,962,849 | 96.17 |
| SRR030244 | L3_1 | 3,667,132 | 3,529,505 | 96.25 |
| SRR030245 | L3_2 | 9,330,126 | 9,143,635 | 98.00 |
| SRR030246 | Pupae_1 | 2,616,980 | 2,501,962 | 95.60 |
| SRR030247 | Pupae_2 | 8,983,652 | 8,704,123 | 96.89 |
| SRR030230 | Adult-Female_1 | 2,143,390 | 2,038,572 | 95.11 |
| SRR030231 | Adult-Female_2 | 8,215,514 | 7,927,427 | 96.49 |
| TOTAL | 129,507,378 | 123,275,905 | 95.25 |
For each library we show the number of reads and the number and percentage of reads mapped to the D. melanogaster genome from Flybase (version dmel_r6.12).