Table 3. Gene classification values and ranking (in parenthesis) according to the four algorithms analyzed and the general rank generated by the BruteAgreeg for experiments 1 (E1) and 2 (E2).
Gene | BestKeeper Power of the gene |
DeltaCt Mean StdDev |
NormFinder S-value |
geNorm M-value |
BruteAgreeg | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
E1 | E2 | |||||||||||
E1 | E2 | E1 | E2 | E1 | E2 | E1 | E2 | 1st | 2nd | 1st | 2nd | |
HMBS | 1.334 (1) | 0.000 (1) | 1.202 (4) | 0.811 (5) | 0.542 (4) | 0.205 (4) | 0.659 (3) | 0.478 (2) | 3 | 3 | 3 | 4 |
RPL19 | 1.386 (2) | 1.242 (4) | 1.145 (2) | 0.796 (4) | 0.477 (2) | 0.220 (6) | 0.620 (2) | 0.478 (1) | 1 | 1 | 2 | 2 |
H3F3A | 1.393 (3) | 5.416 (10) | 1.214 (5) | 1.081 (10) | 0.551 (5) | 0.270 (9) | 0.620 (1) | 1.097 (10) | 4 | 2 | 10 | 10 |
RPL32 | 1.632 (4) | 1.549 (6) | 1.157 (3) | 0.871 (6) | 0.434 (1) | 0.192 (3) | 0.736 (4) | 0.646 (6) | 2 | 4 | 6 | 6 |
TOP2B | 2.244 (5) | 0.963 (2) | 1.259 (6) | 0.909 (8) | 0.498 (3) | 0.321(10) | 0.884 (5) | 0.599 (5) | 5 | 5 | 7 | 7 |
RPL13A | 2.325 (6) | 2.485 (7) | 1.338 (7) | 0.724 (3) | 0.633 (6) | 0.118 (1) | 0.995 (6) | 0.761 (7) | 6 | 6 | 5 | 5 |
SDHA | 2.351 (7) | 4.652 (9) | 1.376 (8) | 1.023 (9) | 0.660 (7) | 0.264 (8) | 1.089 (7) | 1.081 (9) | 7 | 7 | 9 | 9 |
EEF1A1 | 2.742 (8) | 4.002 (8) | 1.584 (9) | 0.897 (7) | 0.900 (8) | 0.217 (5) | 1.192 (8) | 1.001 (8) | 9 | 9 | 8 | 8 |
YHWAZ | 3.204 (9) | 1.225 (3) | 1.141 (1) | 0.715 (2) | 1.175 (9) | 0.238 (7) | 1.348 (9) | 0.566 (4) | 8 | 8 | 4 | 3 |
PPIA | - | 1.422 (5) | - | 0.701 (1) | - | 0.218 (2) | - | 0.492 (3) | - | - | 1 | 1 |