Table 1. sgRNA targeting LuloYLW gene.
sgRNA | 5’- T7-promoter Gene-specific (20mer) Scaffold-F (CRISPR) -3’ | Genomic location | PAM | Strand | GC (%) | Self-complementarity | Off-targets | Efficiency |
---|---|---|---|---|---|---|---|---|
LuloYLW_1 | GAAATTAATACGACTCACTATAGGATATGGGCAGGGATTCCTAGGTTTTAGAGCTAGAAATAGC | Scaffold614:35631 | TGG | - | 52 | 0 | 0 | 0.57 |
LuloYLW_2 | GAAATTAATACGACTCACTATAGGGACATTGAGAGCATATGGGCGTTTTAGAGCTAGAAATAGC | Scaffold614:35643 | AGG | - | 52 | 0 | 0 | 0.62 |
LuloYLW_3 | GAAATTAATACGACTCACTATAGGTCATATTGGTGTCCTCAGGTGTTTTAGAGCTAGAAATAGC | Scaffold614:35707 | CGG | - | 52 | 0 | 0 | 0.49 |
LuloYLW_4 | GAAATTAATACGACTCACTATAGGGCGCTACGTTCTCCGACCTGGTTTTAGAGCTAGAAATAGC | Scaffold614:35695 | AGG | + | 65 | 0 | 0 | 0.57 |
LuloYLW_5 | GAAATTAATACGACTCACTATAGGCTGATGTCTGCGGTAGGCTTGTTTTAGAGCTAGAAATAGC | Scaffold614:35574 | TGG | + | 57 | 0 | 0 | 0.49 |
LuloYLW_6 | GAAATTAATACGACTCACTATAGGCGCATCAAGGCTGATGTCTGGTTTTAGAGCTAGAAATAGC | Scaffold614:35564 | CGG | + | 61 | 1 | 0 | 0.46 |
Scaffold-R | AAAAGCACCGACTCGGTGCCACTTTTTCAAGTTGATAACGGACTAGCCTTATTTTAACTTGCTATTTCTAGCTCTAAAAC |