Skip to main content
. 2018 Sep 4;12(9):e0006769. doi: 10.1371/journal.pntd.0006769

Table 2. Orthologs of DNA break repair genes in Lutzomyia longipalpis.

Gene C-NHEJ A-NHEJ HDR SSA An. gambiae D. melanogaster Lu. longipalpis Location Strand Search method e-value
Ku70 x AGAP002690 FBgn0011774 LLOJ003544 Scaffold21: 254,199–263,494 Reverse tblastn to An. gambiae gene 5.00E-135
Ku80 x AGAP009910 FBgn0041627 LLOJ009466 Scaffold876: 4,739–6,975 Reverse tblastn to An. gambiae gene 2.00E-134
DNA-PKcs x AGAP003967 Absent LLOJ003970 Scaffold2350: 929–24,122 Forward tblastn to An. gambiae gene 0
Ligase 4 x AGAP000623 FBgn0030506 LLOJ008477 Scaffold71: 184,650–188,282 Reverse tblastn to An. gambiae gene 4.00E-15
Artemis x AGAP000597 Not identified LLOJ009728 Scaffold92: 6,692–12,025 Reverse tblastn to An. gambiae gene 8.00E-42
APLF x AGAP004516 FBgn0026737 Not identified tblastn to An. gambiae gene
PNKP x AGAP012174 FBgn0037578 LLOJ000482 Scaffold1077: 23,640–25,668 Reverse tblastn to An. gambiae gene 4.00E-24
APTX x AGAP004307 FBgn0038704 LLOJ001322 Scaffold126: 92,455–93,613 Forward tblastn to An. gambiae gene 6.00E-29
Parp1 x AGAP003230 FBgn0010247 LLOJ001283 Scaffold125: 56,700–70,597 Reverse tblastn to An. gambiae gene 2.00E-60
Ligase 3 x Absent FBgn0038035 LLOJ008477 Scaffold71: 184,650–188,282 Reverse tblastn to D. melanogaster gene 2.00E-43
Ligase 1 x AGAP009222 FBgn0262619 LLOJ008476 Scaffold71: 183,315–187,114 Forward tblastn to An. gambiae gene 0
Xrcc3 x AGAP013180 FBgn0003480 LLOJ005967 Scaffold4: 274,950–281,740 Forward tblastn to An. gambiae gene 2.00E-28
Xrcc1 x AGAP002605 FBgn0026751 LLOJ004541 Scaffold268: 78,732–80,341 Forward tblastn to An. gambiae gene 1.00E-47
ATM x AGAP009632 FBgn0045035 LLOJ002603 Scaffold17: 281,505–321,286 Reverse tblastn to An. gambiae gene 1.00E-170
Mre11 x x AGAP006797 FBgn0020270 LLOJ006671 Scaffold485: 146,630–151,328 Forward tblastn to An. gambiae gene 2.00E-157
Rad50 x x AGAP003676 FBgn0034728 LLOJ001007 Scaffold118: 147,175–151,533 Forward tblastn to An. gambiae gene 0
Nbs1 x x AGAP003213 FBgn0261530 LLOJ000672 Scaffold1100: 41,240–43,475 Reverse tblastn to An. gambiae gene 3.00E-54
Sae2 x x AGAP008637 FBgn0029113 LLOJ009358 Scaffold86: 50,707–65,797 Forward tblastn to An. gambiae gene 0
Exo1 x AGAP004491 FBgn0015553 LLOJ003541 Scaffold21: 238,272–240,297 Forward tblastn to An. gambiae gene 7.00E-19
RPA x AGAP001421 FBgn0010173 LLOJ006328 Scaffold437: 68,232–71,334 Reverse tblastn to An. gambiae gene 0
Sgs1 x AGAP002967 FBgn0002906 LLOJ001099 Scaffold12: 322,054–329,185 Forward tblastn to An. gambiae gene 0
Dna2 x AGAP004685 FBgn0030170 LLOJ003812 Scaffold227: 12,526–19,819 Reverse tblastn to An. gambiae gene 0
Rad51 x AGAP013412 FBgn0003479 LLOJ000926 Scaffold1164: 24,172–26,802 Reverse tblastn to An. gambiae gene 2.00E-171
Rad54 x AGAP008748 FBgn0002989 LLOJ000406 Scaffold106: 72,542–75,384 Forward tblastn to An. gambiae gene 0
BRCA2 x AGAP007032 FBgn0050169 Not identified
Polδ x AGAP011731 FBgn0263600 LLOJ000780 Scaffold113: 143,876–150,886 Forward tblastn to An. gambiae gene 8.00E-26
Polθ x AGAP004615 FBgn0264326 Not identified
Rad1 x AGAP002255 FBgn0026778 LLOJ004989 Scaffold305: 92,142–93,895 Forward tblastn to An. gambiae gene 1.00E-37
Rad10/Ercc1 x AGAP004029 FBgn0028434 LLOJ005134 Scaffold320: 65,326–117,135 Forward tblastn to An. gambiae gene 1.00E-16
Msh2 x AGAP010282 FBgn0015546 LLOJ000903 Scaffold1156: 46,215–59,400 Reverse tblastn to An. gambiae gene 0
Slx4 x AGAP007582 FBgn0002909 Not identified