Table 1.
Gene contents of P.massoniana chloroplast genome based on genome annotation.
| Category | Gene Contents |
|---|---|
| Subunits of photosystem I | psaA, psaB, psaC, psaI, psaJ, psaMa |
| Subunits of photosystem II | psbA, psbB, psbC, psbD, psbE, psbF, psbH, psbI, psbJ, psbK, psbL, psbM, psbN, psbT, psbZ |
| Small subunit of ribosome | rps2, rps3, rps4, rps7, rps8, rps11, rps12b, rps14, rps15, rps18, rps19 |
| Large subunit of ribosome | rpl2b, rpl14, rpl16b, rpl20, rpl22, rpl23, rpl32, rpl33, rpl36 |
| Subunits of cytochrome b/f complex | petA, petBb, petDb, petG, petL, petN |
| Subunits of ATP synthase | atpA, atpB, atpE, atpFb, atpH, atpI |
| DNA-dependent RNA polymerase | rpoA, rpoB, rpoC1b, rpoC2 |
| ChlorophyII biosynthesis | chlB, chlL, chlN |
| Protease | clpP |
| Maturase | matK |
| Envelope membrane protein | cemA |
| Translation initiation factor | infA |
| Cytochrome c biogenesis | ccsA |
| Subunit Acetyl-CoA-Carboxylate | accD |
| Subunit of rubisco | rbcL |
| Ribosomal RNAs | rrn4.5, rrn5, rrn16, rrn23 |
| Conserved open reading frames | ycf1, ycf2, ycf3b, ycf4, ycf12, ycf68 |
| Transfer RNA | trnA-UGCb, trnC-GCA, trnD-GUC, trnE-UUC, trnF-GAA, trnfM-CAU, trnG-UCC, trnG-GCCb, trnH-GUGa, trnI-GAUab, trnK-UUUb |
| trnL-CAA, trnL-UAAb, trnL-UAG, trnM-CAU, trnN-GUU, trnP-GGG, trnP-UGG, trnQ-UUG, trnR-ACG, trnR-CCG, trnR-UCU | |
| trnS-GCUa, trnS-GGA, trnS-UGA, trnT-GGUa, trnT-UGU, trnV-GAC, trnV-UACb, trnW-CCA, trnY-GUA |
a Gene-copies in genome; b Intro-containing gene.