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. 2018 Sep 13;40(5):2659–2673. doi: 10.3892/or.2018.6707

Table II.

Gene list of 36 feature genes in the optimal gene set identified by support vector machine classifier.

Gene BC Degree logFC P-value FDR Gene BC Degree logFC P-value FDR
TP53 0.8549 36 1.1154 0.0034 0.0261 GABRE 0.2513 3 1.5580 0.0039 0.0303
LIPH 0.8000 3 2.1783 0.0035 0.0265 KLRF1 0.2485 3 −2.9154 0.0022 0.0166
TNNT1 0.7000 2 0.8604 0.0049 0.0380 SAT1 0.2477 3 0.5964 0.0062 0.0475
MYC 0.4611 17 0.6524 0.0064 0.0492 SMARCD3 0.2354 2 0.9899 0.0042 0.0326
VCAM1 0.3527 6 −1.0917 0.0054 0.0414 PLS1 0.2336 2 1.1975 0.0047 0.0364
CDKN1A 0.3446 12 1.0392 0.0044 0.0338 EGR1 0.2312 4 1.8583 0.0005 0.0040
RPS7 0.3278 3 0.6217 0.0064 0.0489 SPC24 0.2207 2 −0.8575 0.0061 0.0472
HBA1 0.3031 3 1.3074 0.0040 0.0305 HP 0.2148 3 −1.0778 0.0048 0.0368
TIE1 0.3000 3 −2.2494 0.0020 0.0150 UCHL1 0.2140 3 −1.6059 0.0013 0.0097
JUN 0.2881 10 0.6921 0.0057 0.0439 SOCS1 0.2133 3 −0.9843 0.0057 0.0437
RBPMS 0.2856 12 1.0742 0.0049 0.0377 DGCR6 0.2104 2 −1.4870 0.0046 0.0356
APOA1 0.2813 4 −2.0866 0.0003 0.0025 FZD6 0.2104 2 0.8516 0.0056 0.0435
HERC5 0.2803 4 −1.2422 0.0046 0.0353 RAD18 0.2086 2 1.1321 0.0054 0.0413
BAG2 0.2712 3 −1.5688 0.0030 0.0231 HBB 0.2080 2 1.1753 0.0037 0.0286
BHLHE40 0.2651 3 0.8275 0.0051 0.0389 SATB1 0.2075 3 2.4843 0.0014 0.0111
CEP55 0.2538 2 −0.8150 0.0064 0.0493 FOXC1 0.2075 2 1.3750 0.0041 0.0314
PSEN2 0.2534 5 −1.1137 0.0049 0.0377 PITX1 0.2055 2 −1.3033 0.0045 0.0343
ANGPTL4 0.2518 3 −1.3853 0.0039 0.0298 ANXA1 0.2047 2 1.0398 0.0030 0.0233

BC, betweenness centrality; FC, fold change; FDR, false discovery rate.