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. 2018 Sep 24;9:67. doi: 10.1186/s40104-018-0283-8

Table 3.

Relative abundance (%) of 10 targeted rumen bacteria species and the 16S rRNA gene copy numbers of the total rumen bacterial community in the rumen solids-fraction of the most- (n = 6) and the least- (n = 6) efficient beef cattle on RFI testing for 70 d during the finishing period

Items1 RFI2 SE3 Sex SE4 P-value
Most-efficient animals Least-efficient animals Steers Heifers RFI Sex RFI × sex
Target bacterial species
A. lipolytica 1.80 × 10−4 9.00 × 10−5 0.27 1.20 × 10−4 1.30 × 10− 4 0.31 0.48 0.96 0.45
B. proteoclasticus 1.91 × 10−2 1.12 × 10− 2 0.22 1.33 × 10− 2 1.60 × 10− 2 0.25 0.47 0.80 0.66
E. ruminantium 9.13 × 10-2a 4.18 × 10-2b 0.10 9.09 × 10-2a 4.20 × 10-2b 0.11 0.05 0.05 0.84
F. succinogenes 2.90 × 10-4a 1.00 × 10-4b 0.13 3.00 × 10-4a 0.90 × 10-4b 0.14 0.03 0.02 0.79
M. elsdenii 7.00 × 10-5a 3.00 × 10-5b 0.12 4.00 × 10−5 5.00 × 10−5 0.12 0.04 0.73 0.35
P. bryantii 4.31 × 10−2 3.52 × 10−2 0.14 5.37 × 10−2 2.82 × 10− 2 0.16 0.67 0.20 0.40
S. ruminantium 1.25 × 10−1 1.17 × 10−1 0.08 1.21 × 10−1 1.20 × 10−1 0.09 0.80 0.97 0.95
S. amylolytica 0.70 × 10-4b 3.80 × 10-4a 0.14 2.40 × 10−4 1.20 × 10−4 0.14 < 0.01 0.16 0.83
S. bovis 5.63 × 10−3 6.75 × 10−3 0.25 6.30 × 10− 3 6.03 × 10− 3 0.29 0.83 0.96 0.48
S. dextrinosolvens 4.81 × 10−2 1.22 × 10−2 0.48 1.38 × 10− 2 4.26 × 10− 2 0.56 0.41 0.49 0.28
Bacteria density
 The 16S rRNA gene copy numbers (log10)/ng DNA5 8.03b 8.07a 0.01 8.05 8.05 0.01 0.05 0.89 0.60

Means with different superscripts (a, b) within row represent differences among overall RFI or sex effects (P ≤ 0.05)

1Data were logit transformed to ensure normality of residuals

2RFI residual feed intake

3SE standard error of the mean for RFI effect

4SE standard error of the mean for sex effect

516S rRNA gene copy number (log10)/ng DNA