TABLE 2.
Antibiotic and parameter | Median (minimum, maximum) value for mice that: |
P valuec | AUROC (95% CI) | |
---|---|---|---|---|
Dieda | Survivedb | |||
Moxifloxacin | ||||
Concn | 110.0 (70.5, 172.7) | 52.9 (0.0, 162.1) | 0.00025 | 0.87 (0.76, 0.95) |
α diversity | ||||
Change of Shannon index | −1.7 (−3.0, −1.0) | −1.0 (−1.9, 0.1) | <10−4 | 0.91 (0.80, 0.98) |
Change of no. of OTUs | −135.9 (−207.3, −52.2) | −72.9 (−201.0, 74.5) | 0.001 | 0.83 (0.67, 0.95) |
Change of Chao1 index | −137.9 (−213.4, −46.2) | −75.5 (−229.3, 83.5) | 0.002 | 0.81 (0.64, 0.93) |
β diversity | ||||
UniFrac distance | ||||
Unweighted | 0.61 (0.56, 0.76) | 0.51 (0.37, 0.65) | <10−5 | 0.95 (0.90, 0.99) |
Weighted | 0.33 (0.24, 0.48) | 0.26 (0.13, 0.57) | 0.02 | 0.73 (0.58, 0.87) |
Bray-Curtis dissimilarity | 0.78 (0.63, 0.86) | 0.60 (0.31, 0.87) | <10−4 | 0.91 (0.81, 0.99) |
Clindamycin | ||||
Concn | 5.0 (0.0, 37.8) | 0.0 (0.0, 4.4) | <10−6 | 0.81 (0.72, 0.91) |
α diversity | ||||
Change of Shannon index | −2.2 (−4.3, −0.4) | −1.1 (−2.6, 0.0) | <10−6 | 0.88 (0.78, 0.96) |
Change of no. of OTUs | −223.9 (−344.6, −75.8) | −106.8 (−202.2, −22.0) | <10−5 | 0.86 (0.75, 0.95) |
Change of Chao1 index | −227.7 (−358.2, −73.8) | −110.0 (−209.0, −22.7) | <10−6 | 0.86 (0.76, 0.95) |
β diversity | ||||
UniFrac distance | ||||
Unweighted | 0.71 (0.59, 0.84) | 0.60 (0.49, 0.68) | <10−10 | 0.94 (0.88, 0.99) |
Weighted | 0.42 (0.24, 0.62) | 0.30 (0.24, 0.59) | <10−6 | 0.87 (0.76, 0.96) |
Bray-Curtis dissimilarity | 0.86 (0.71, 0.98) | 0.70 (0.61, 0.87) | <10−9 | 0.92 (0.84, 0.97) |
n = 10 for the moxifloxacin study and 28 for the clindamycin study.
n = 60 for the moxifloxacin study and 32 for the clindamycin study.
By the nonparametric Wilcoxon test.