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. 2018 Jul 30;131(10):2179–2196. doi: 10.1007/s00122-018-3146-y

Table 2.

QTL for salt tolerance sub-traits in the Excalibur × Kukri DH mapping population under control and salt stress (100 mM NaCl for 10 days). Trait name, QTL name, treatment, chromosome (Chr), position on chromosome, most significant marker, LOD score, additive effect and phenotypic variation (R2) explained by the QTL (% variation) are shown

Trait QTL Treatment Chr Position Marker LOD Additive R 2
Growth(15) QG(15).asl-7A Salt/control 7A 112.31 X2279012.58AC 5.0 0.035 14.1
RGR QCRGR.asl-5A Control 5A 126.21 X1264710.28CG 12.9 0.006 29.8
RGR QCRGR.asl-7A Control 7A 99.41 X1116135.61GA 3.6 − 0.004 7.0
Na+ µmol/g DW QNa.asl-7A Salt 7A 75.01 wmc0017 3.7 − 15.7 11.3
Na+ µmol/g DW QNa.asl-1A.1 Control 1A 106.61 X2264210.64CG 3.3 14.5 10.1
Na+ µmol/g DW QNa.asl-1A.2 Control 1A 120.41 X1125323.58TG 5.9 − 16.6 18.2
Na+ µmol/g DW QNa.asl-6A Control 6A 29.91 X1127808.37CG 2.7 4.6 4.9
K+ µmol/g DW QK.asl-2B.1 Salt 2B 52.61 X1103701.44AG 3.8 39.7 8.1
K+ µmol/g DW QK.asl-2B.2 Salt 2B 87.81 X1022175.20CT 6.1 − 50.0 12.1
K+ µmol/g DW QK.asl-5A Salt 5A 125.51 Vrn-A1 12.9 57.4 28.2
Na+: K+ DW QNa:K.asl-5A.1 Control 5A 172.21 X1130301.5CT 5.0 − 0.020 13.8
Na+: K+ DW QNa:K.asl-5A.2 Control 5A 189.81 X1083587.10GA 3.0 0.015 8.0
Na+: K+ DW QNa:K.asl-6A Control 6A 0.01 X1397091.19CT 3.8 0.012 10.1
Na+: K+ DW QNa:K.asl-7A Control 7A 39.31 X1193500.27AT 2.6 − 0.010 6.6
K+: Na+ DW QK:Na.asl-6A Salt 6A 80.31 X3023657.26CG 3.6 − 3.4 10.1

RGR = relative growth rate (days 1–5), Growth (15) = RGR of plants between 1 and 5 days after salt stress (RGR salt/RGR control)