Table 1.

SNPs which reached significance (P < 5 × 10⁻⁵) in a multi-breed population of beef cattle after meta-analysis of GWAS results for each respective trait.

SNP I.D.	Trait of interest	Chr_mb	Zscore	P-value	Nearby gene	SNP location relative to gene
rs43555985	RFI	8_69	−4.458	8.28E-06	GFRA2	53.4 kb upstream
rs41638273	RFI	2_6	4.4	1.08E-05	SLC40A1	15.7 kb upstream
rs109695205	RFI	5_113	4.313	1.61E-05	NFAM1	26.5 kb upstream
rs110161277	RFI	2_2	4.192	2.76E-05	PLEKHB2	143.8 kb downstream
rs110418027	RFI	5_116	−4.089	4.34E-05	SMC1B	Intron variant
rs43691372	RFI	12_47	4.082	4.47E-05	DIS3	3′ UTR variant
rs42820242	RFI	14_44	4.081	4.48E-05	IL7	104.2 kb downstream
rs386023985	ADG	19_48	−6.593	4.32E-11	ERN1	7.9 kb upstream
rs135897656	ADG	3_119	6.195	5.83E-10	CSF2RA	Intron variant
rs136457441	ADG	19_28	5.936	2.93E-09	RPL26	Missense variant
rs110660154	ADG	1_19	5.314	1.08E-07	SPATA16	265 kb downstream
rs110780286	ADG	18_15	4.492	7.06E-06	ITFG1	Intron variant
rs382426807	ADG	19_43	4.473	7.70E-06	STAT5A	Synonymous variant
rs41595251	ADG	9_91	−4.375	1.22E-05	OPRM1	269 kb upstream
rs110590483	ADG	11_39	−4.243	2.21E-05	CCDC85A	509 kb downstream
rs109252082	ADG	19_53	4.124	3.72E-05	TBC1D16	Intron variant
rs41592667	ADG	9_35	4.12	3.78E-05	FRK	88 kb downstream
rs41630180	ADG	17_1	−4.097	4.18E-05	TLL1	Intron variant
rs41614223	ADG	9_27	−4.086	4.39E-05	NKAIN2	8.8 kb downstream
rs137576435	ADG	19_12	−4.079	4.52E-05	BCAS3	Intron variant
rs136789347	ADG	23_52	−4.069	4.72E-05	OR5M10	13.8 kb upstream
IDBV32000008978	FI	20_67	4.355	1.33E-05	ADAMTS16	Synonymous variant
rs55617218	FI	19_14	−4.205	2.61E-05	HNF1B	Intron variant
rs109691080	FI	1_6	4.084	4.43E-05	MAP3K7CL	58.9 kb upstream

SNP: Single nucleotide polymorphism; RFI: Residual feed intake; ADG: Average daily gain; FI: Feed intake; Chr_mb: Chromosome_megabase.