Table 4.
Results from eQTL analysis of genome-wide significant SNPs in liver and muscle.
| SNP | Nearest Gene | Trait | Liver P-value | Muscle P-value |
|---|---|---|---|---|
| rs43555985 | GFRA2 | RFI | 0.0038* | 0.25 |
| rs109695205 | NFAM1 | RFI | 0.95 | 0.55 |
| rs110418027 | SMC1B | RFI | 0.15 | Not expressed |
| rs43691372 | DIS3 | RFI | 0.96 | 0.16 |
| rs386023985 | ERN1 | ADG | 0.99 | 0.23 |
| rs110780286 | ITFG1 | ADG | 0.83 | 0.23 |
| rs382426807 | STAT5A | ADG | 0.94 | 0.72 |
| rs41592667 | FRK | ADG | 0.22 | 0.19 |
| rs41630180 | TLL1 | ADG | Not expressed | 0.33 |
| rs137576435 | BCAS3 | ADG | 0.25 | 0.93 |
| rs109691080 | MAP3K7CL | FI | Not expressed | 0.80 |
SNP: Single nucleotide polymorphism; ADG: average daily gain; FI: feed intake; RFI: residual feed intake, *eQTLs were designated as significant if they reached P < 0.0045.