Table 1.
Primers pairs | Sequence 5′−3′ | Target and application | Amplicon size on gene sequence (bp) | ||
---|---|---|---|---|---|
Forward | Reverse | Forward | Reverse | ||
A1–9F | A1–4R | TGTTGGGCCTCCTGATCG | AGCCTCAGATGCAGGGTAC | TdHsp26-A1 isolation and chromosomal localization | 1,171 |
A2–24F | A2–18R | CCACCAGACAATCACTGCAA | CAGGGTACAGTCTCACACG | TdHsp26-A2 isolation and chromosomal localization | 939 |
A3–20F | A3–29R | GGCGAAGATCTGCCAAAGTAT | AACCAGCACAACCCTCTA | TdHsp26-A3 isolation and chromosomal localization | 1,106 |
B1–5F | B1–6R | GACACTCTCTCGTTTCAATTCTC | GTTATCAGCTTCTTCCGGG | TdHsp26-B1 isolation | 1,182 |
B1–17F | B1–6R | TCTCCAACCAGGTACGCC | GTTATCAGCTTCTTCCGGG | TdHsp26-B1 1st round HRM | 1,378 |
B1–PT10F | B1–PT10R | CGATGCGGCAGATGCTT | TGACGAGCGCGTCGC | TdHsp26-B1 2nd round HRM, chromosomal localization and RT qPCR analysis | 211 |
A1–PT31F | A1–PT31R | CCAGGCCCAGAACGCT | CCTCCTTcTCGTCCTCCATa | RT qPCR | 338 |
A2–PT24F | A2–PT25R | CGCTaTaGTCAGCCGCCTt | GCGaCGCTGGACTGCa | RT qPCR | 206 |
A3–PT27F | A3–PT27R | ATGGCTGcaGCGAACGCt | CGTCGACGGAGTTGTCCCTa | RT qPCR | 172 |
ACT–Fw | ACT–Rev | TCCTGTGTTGCTGACTGAGG | GGTCCAAACGAAGGATAGCA | Actin housekeeping | 240 |