. 2018 Sep 19;9:2198. doi: 10.3389/fmicb.2018.02198

Table 3.

Biodiversity indexes for different microbial groups (Data in the same column not sharing a letter in common are significantly different according to Tukey test, p < 0.05).

Sample	S	N	d	J	H′	1-λ
	Biodiversity index

Total bacteria (endosphere)
S1	8.67 ± 0.88^ab	526 ± 77.42^a	1.22 ± 0.12^ab	0.91 ± 0.01^a	1.96 ± 0.12^a	0.83 ± 0.02^ab
S2	10.0 ± 0.58^a	538 ± 71.90^a	1.44 ± 0.08^a	0.91 ± 0.00^a	2.10 ± 0.05^a	0.85 ± 0.01^a
S4	7.67 ± 0.33^ab	366 ± 10.71^a	1.13 ± 0.06^ab	0.88 ± 0.01^a	1.78 ± 0.03^ab	0.78 ± 0.00^bc
S13	6.33 ± 0.33^b	327 ± 20.03^a	0.92 ± 0.05^b	0.86 ± 0.01^a	1.58 ± 0.05^b	0.74 ± 0.01^c
Total bacteria (rhizosphere)
S1	31 ± 0.00^a	34998 ± 1362^a	2.87 ± 0.01^a	0.97 ± 0.01^a	3.34 ± 0.02^a	0.96 ± 0.00^a
S2	25 ± 0.67^b	29980 ± 819^a	2.36 ± 0.06^b	0.97 ± 0.00^a	3.15 ± 0.03^b	0.95 ± 0.00^a
S4	31 ± 0.33^a	33748 ± 682^a	2.91 ± 0.03^a	0.97 ± 0.01^a	3.34 ± 0.03^a	0.96 ± 0.00^a
S13	30 ± 1.20^a	33878 ± 1495^a	2.81 ± 0.11^a	0.98 ± 0.00^a	3.33 ± 0.05^a	0.96 ± 0.00^a
Actinomycete (endosphere)
S1	9.33 ± 0.67^a	10889 ± 1265^a	0.90 ± 0.08^a	0.96 ± 0.00^b	2.14 ± 0.07^a	0.87 ± 0.01^a
S2	10.0 ± 1.00^a	7332 ± 840^ab	1.01 ± 0.10^a	0.99 ± 0.00^a	2.27 ± 0.09^a	0.89 ± 0.01^a
S4	8.00 ± 0.58^a	4258 ± 446^b	0.84 ± 0.06^a	0.98 ± 0.01^a	2.04 ± 0.08^a	0.86 ± 0.01^a
S13	8.33 ± 0.33^a	5490 ± 241^b	0.85 ± 0.03^a	0.99 ± 0.00^a	2.10 ± 0.04^a	0.88 ± 0.01^a
Actinomycete (rhizosphere)
S1	15.3 ± 0.33^b	22305 ± 252^a	1.43 ± 0.03^b	0.97 ± 0.00^a	2.64 ± 0.03^b	0.92 ± 0.00^b
S2	20.0 ± 0.00^a	25620 ± 1528^a	1.87 ± 0.01^a	0.98 ± 0.00^a	2.94 ± 0.01^a	0.95 ± 0.00^a
S4	21.7 ± 0.33^a	26579 ± 677^a	2.03 ± 0.03^a	0.97 ± 0.00^a	2.99 ± 0.03^a	0.95 ± 0.00^a
S13	21.0 ± 1.15^a	22624 ± 1019^a	1.99 ± 0.11^a	0.96 ± 0.01^a	2.91 ± 0.09^a	0.94 ± 0.01^ab
Total fungi (endosphere)
S1	7.67 ± 0.67^a	11905 ± 720^a	0.70 ± 0.06^a	0.91 ± 0.01^a	1.86 ± 0.07^a	0.82 ± 0.01^a
S2	9.67 ± 1.33^a	13257 ± 1446^a	0.91 ± 0.13^a	0.91 ± 0.01^a	2.04 ± 0.14^a	0.84 ± 0.02^a
S4	9.67 ± 1.20^a	12729 ± 2213^a	0.92 ± 0.11^a	0.91 ± 0.01^a	2.06 ± 0.12^a	0.84 ± 0.02^a
S13	9.00 ± 0.58^a	11884 ± 3230^a	0.86 ± 0.04^a	0.91 ± 0.02^a	2.01 ± 0.10^a	0.83 ± 0.02^a
Total fungi (rhizosphere)
S1	13.7 ± 0.33^a	22194 ± 1140^a	1.27 ± 0.03^a	0.90 ± 0.01^b	2.35 ± 0.04^a	0.88 ± 0.01^a
S2	3.00 ± 0.00^b	5317 ± 616^b	0.23 ± 0.00^b	0.99 ± 0.00^a	1.08 ± 0.00^a	0.66 ± 0.00^a
S4	8.33 ± 3.18^a	14588 ± 6196^ab	0.75 ± 0.31^ab	0.93 ± 0.00^b	1.72 ± 0.54^a	0.74 ± 0.14^a
S13	8.67 ± 1.33^a	12753 ± 3657^ab	0.81 ± 0.12^ab	0.89 ± 0.02^b	1.90 ± 0.18^a	0.82 ± 0.04^a
Ascomycete (endosphere)
S1	9.33 ± 0.33^a	10342 ± 1484^a	0.90 ± 0.04^a	0.97 ± 0.01^a	2.16 ± 0.04^a	0.88 ± 0.01^a
S2	7.33 ± 0.33^a	6080 ± 375^ab	0.73 ± 0.03^a	0.99 ± 0.00^a	1.96 ± 0.05^a	0.86 ± 0.01^ab
S4	5.00 ± 0.58^b	3941 ± 693^b	0.48 ± 0.06^b	0.99 ± 0.00^a	1.58 ± 0.12^b	0.79 ± 0.03^bc
S13	5.00 ± 0.58^b	4960 ± 1095^b	0.47 ± 0.06^b	0.94 ± 0.02^a	1.49 ± 0.08^b	0.75 ± 0.01^c
Ascomycete (rhizosphere)
S1	11.33 ± 0.67^b	159073 ± 10539^a	0.86 ± 0.06^b	0.87 ± 0.03^a	2.11 ± 0.08^ab	0.86 ± 0.01^a
S2	15.67 ± 0.33^a	194864 ± 27794^a	1.21 ± 0.03^a	0.88 ± 0.04^a	2.41 ± 0.09^a	0.89 ± 0.01^a
S4	12.67 ± 0.33^b	135092 ± 33071^a	0.99 ± 0.01^b	0.90 ± 0.00^a	2.28 ± 0.03^ab	0.89 ± 0.00^a
S13	11.67 ± 0.67^b	112592 ± 25021^a	0.92 ± 0.04^b	0.79 ± 0.05^a	1.95 ± 0.15^b	0.81 ± 0.04^a

S, total species; N, total individual; d, Mergalef index; J, Pielou’s index; H′, Shannon index; 1-λ, Simpson index.