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. Author manuscript; available in PMC: 2018 Sep 26.
Published in final edited form as: Pharmacogenomics J. 2015 Jan 20;15(5):422–429. doi: 10.1038/tpj.2014.83

Table 3:

Means of the estimates of parameters for the pharmacodynamic approach and their standard errors (in parentheses) from simulated data by mimicking the DICE data structure with different sample sizes based on 1000 simulation replicates (full genotypic model).


Parameter True Value Sample Size
100 200 400

Emax1 9.934 10.511 (1.653) 10.465 (1.417) 10.332 (1.167)
H1 1.472 1.441 (0.589) 1.435( 0.562) 1.455 (0.517)
EC50(1) 0.069 0.094 (0.089) 0.082 (0.050) 0.076 (0.024)
Emax2 17.637 17.317 (2.539) 17.515 (2.228) 17.668 (1.884)
H2 2.509 2.864 (0.796) 2.723 (0.662) 2.618 (0.477)
E50(2) 0.551 0.544 (0.091) 0.549 (0.068) 0.552 (0.053)
Emax3 19.858 20.185 (2.422) 20.060 (2.019) 19.976 (1.567)
H3 2.2 2.580 (0.955) 2.430 (0.779) 2.340 (0.583)
EC50(3) 0.13 0.144 (0.047) 0.137 (0.028) 0.134 (0.019)
α1 −0.075 −0.077 (0.086) −0.074 (0.058) −0.074 (0.040)
α2 0.113 0.116 (0.109) 0.111 (0.072) 0.112 (0.050)
v11 2.135 2.178 (1.100) 2.150 (0.775) 2.117 (0.527)
v12 −1.065 −1.074 (1.407) −1.104 (0.966) −1.104 (0.681)
v13 −3.553 −3.531 (1.427) −3.532 (0.944) −3.521 (0.668)
v14 3.037 2.978 (1.641) 3.014 (1.124) 3.039 (0.822)
v21 3.855 3.943 (1.666) 3.925 (0.956) 3.872 (0.627)
v22 −6.059 −6.031 (2.081) −6.039(1.279) −6.044 (0.874)
v23 4.904 5.001 (2.418) 4.943 (1.417) 4.902 (0.998)
v31 −0.798 −0.829 (0.699) −0.814 (0.464) −0.816 (0.322)
ρ 0.754 0.738 (0.027) 0.746 (0.020) 0.750 (0.014)
σ2 71.401 66.294 (6.071) 68.769 (4.415) 69.995 (3.103)

Note: α1 and α2 are the effects due to two continuous covariates; v1, v2 and v3 are the effects due to three discrete covariates each with a different level; and ρ and σ2 are the autoregressive parameters that model the covariance structure.