Table 3.
SNPs that are suggestive as being of genome-wide significance (p < 5 × 10− 6) in univariate and joint analysis*
| SNP | Chr:Pos | Univariate analysis (LMM) | Joint analysis | ||||
|---|---|---|---|---|---|---|---|
| TG | HDL-C | SSU | mvLMM | USAT | pUSAT | ||
| rs90513 | 1:3189344 | 3.33E-02 | 1.20E-06 | 1.30E-05 | 7.18E-06 | 2.36E-05 | 9.88E-06 |
| rs11940232 | 4:138953336 | 6.32E-05 | 1.98E-05 | 1.47E-06 | 8.56E-06 | 2.65E-06 | 2.58E-06 |
| rs17058802 | 4:173880215 | 5.66E-07 | 4.56E-03 | 2.23E-06 | 3.39E-06 | 4.13E-06 | 2.60E-06 |
| rs708010 | 6:37071350 | 1.86E-04 | 4.69E-06 | 1.01E-06 | 5.48E-06 | 2.19E-06 | 2.12E-06 |
| rs17619780 | 6:40472303 | 7.58E-08 | 2.22E-01 | 4.95E-06 | 1.59E-07 | 9.60E-06 | 3.01E-07 |
| rs12533593 | 7:147451966 | 6.69E-03 | 2.28E-06 | 7.72E-06 | 1.22E-05 | 1.48E-05 | 1.01E-05 |
| rs7300117 | 12:130266575 | 2.24E-05 | 8.66E-01 | 5.60E-04 | 3.92E-06 | 9.99E-04 | 8.58E-06 |
| rs2880301 | 13:18998534 | 9.66E-01 | 7.29E-02 | 1.95E-01 | 1.19E-01 | 1.69E-13 | 2.22E-01 |
| rs17464499 | 22:26221715 | 3.20E-02 | 4.48E-06 | 3.02E-05 | 2.67E-05 | 6.30E-05 | 3.29E-05 |
*pValues of different approaches that reach suggestive genome-wide significance level are in bold