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. 2018 Apr 26;34(19):3417–3418. doi: 10.1093/bioinformatics/bty344

Table 1.

Biological questions that can be answered by MetaboDiff

Question Function
Missing measurements in dataset? na_heatmap
Outliers in dataset? outlier_heatmap
Metabolome-wide changes between samples? pca_plot, tsne_plot
Differential metabolite abundance between groups? diff_test
Differential sub-pathways between groups? MS_plot
How do metabolites relate to each other in sub-pathway? MOI_plot