Table 2.
Differential expression of Ab genes associated with the type 6 secretion system in PgAb communities
| Gene Name | Gene Name | log2 Fold Change1 | Product |
|---|---|---|---|
| AB57_1158 | 0.36272 | Rhs element Vgr protein, putative | |
| AB57_1442 | 0.18630 | putative VGR-related protein | |
| AB57_1479 | tssB | 1.4309 | type VI secretion protein, family |
| AB57_1480 | tssC | 1.19192 | type VI secretion protein, EvpB/family |
| AB57_1481 | Hcp | 0.79672 | type VI secretion system effector, Hcp1 family |
| AB57_1482 | tssE | 0.94882 | type VI secretion system lysozyme-related protein |
| AB57_1483 | tssF | 0.3391 | type VI secretion protein, family |
| AB57_1484 | tssG | −0.28688 | type VI secretion protein, family |
| AB57_1485 | −0.69577 | hypothetical protein | |
| AB57_1486 | tssM | 0.31656 | type VI secretion protein IcmF |
| AB57_1487 | tagF | 0.393 | type VI secretion-associated protein, family |
| AB57_1488 | tagN | 0.31515 | OmpA/MotB domain protein |
| AB57_1489 | PAAR Class I | −0.12307 | hypothetical protein |
| AB57_1490 | clpV | 0.45938 | type VI secretion ATPase, ClpV1 family |
| AB57_1491 | tssA | 1.00499 | type VI secretion-associated protein, ImpA family |
| AB57_1492 | tssK | 0.94866 | type VI secretion protein, family |
| AB57_1493 | tssL | 0.52583 | type IV / VI secretion system protein, DotU family |
| AB57_1494 | 0.72873 | hypothetical protein | |
| AB57_1495 | tagX | 0.53119 | D-alanyl-D-alanine carboxypeptidase family |
| AB57_3817 | 0.96823 | putative VGR-related protein |
1
Results are expressed as log2 fold change in PgAb compared to Ab alone. Higher mRNA levels are represented as red and statistically unchanged are in black.