Table 1.
Data sources incorporated into PyOpenWorm (https://pyopenworm.readthedocs.io/en/latest/data_sources.html).
| data type | source |
|---|---|
| neurons and muscles | |
| names | WormBase; Harris et al. [25] |
| neuron types, cell descriptions, lineage names, neurotransmitters, neuropeptides, receptors, innexins | WormAtlas; Altun et al. [27] |
| monoamine secretors and receptors, neuropeptide secretors and receptors | Bentley et al. [11] |
| connectome | |
| neuron to neuron and neuron to muscle chemical synapses and gap junctions | personal communication by S. Cook (original data set available at http://bit.ly/2MGiv9K ); White et al. [8] |