Table 3.
Distance (kb) | r2 (p < 0.05) | Significant LD pairs | Marker pairs in complete LD | Marker pairs in complete LD (%) |
---|---|---|---|---|
0–5 | 0.796 | 12,440 | 8,153 | 65.54 |
>5–100 | 0.619 | 65,140 | 23,507 | 36.09 |
>100–250 | 0.506 | 84,254 | 15,808 | 18.76 |
>250–500 | 0.421 | 120,362 | 12,390 | 10.29 |
>500–750 | 0.350 | 108,080 | 6,011 | 5.56 |
>750–1000 | 0.318 | 95,907 | 3,138 | 3.27 |
>1000–1500 | 0.280 | 164,489 | 4,970 | 3.02 |
>1500–2000 | 0.230 | 141,971 | 2,601 | 1.83 |
>2000–2500 | 0.200 | 115,415 | 1,488 | 1.29 |
>2500–5000 | 0.167 | 393,990 | 3,476 | 0.88 |
>5000–7500 | 0.133 | 232,003 | 233 | 0.10 |
>7500 | 0.075 | 623,818 | 7 | 0.00 |
Total | 2,157,869 | 81,782 | ||
LD, linkage disequilibrium; kb, kilo bases; r2, co-efficient of determination.