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. 2018 Sep 26;92(20):e00919-18. doi: 10.1128/JVI.00919-18

TABLE 2.

Primer sequences

Primer function and name Sequencea
Y2H screen
    EcoRI-UL135Y2HF 5′-GGGAATTCCATATGTCCTTATTTACCCAGCGCCGAGGCCGCAAGCGATC-3′
    UL135R-BamHI 5′-CGCGGATCCTCAGGTCATCTGCATTGACTCGGCGTCCTTCATGAC-3′
    pGAD-FWD 5′-TAATACGACTCACTATAGGGCGA-3′
    pGAD-REV 5′-AGATGGTGCACGATGCACAG-3′
Mutagenesis
    UL135ΔSH3cI-FWD 5′-PHOS-CGCCTACGCCGGCGGTCCG-3′
    UL135ΔSH3c1-REV 5′-GCCGCCTCTTGCGCCCGG-3′
    UL135ΔSH3cII-FWD 5′-PHOS-CCGGGGCCAAGAAGCGGCCGCCTACG-3′
    UL135ΔSH3cII-REV 5′-GCGCCGGAGGTGGCTTCCAGGA-3′
    UL135ΔAtypSH3-FWD 5′-PHOS-CCGCTGCAGTCGGCTGGACACCG-3′
    UL135ΔAtypSH3-REV 5′-GTTTCGTGGGCGCCGGTGTTTTCT-3′
    UL135ΔCIN85#1-FWD 5′-GCCGCTAAGAACCTGAGCACGCCGCCCA-3′
    UL135ΔCIN85#1-REV 5′-PHOS-CGCGGGTATCGGCGTCGGGG-3′
    UL135ΔCIN85#2-5-FWD 5′-GCCGCTCTGCCGCGCACCGTCGGGCTGGAGAATCTCTCGAAGGTGGGACTCTCGTGTCCCTGTCCCCGAGCCGCTACGCCGACGGAGCCGACCA-3′
    UL135ΔCIN85#2-5-REV 5′-PHOS-ATTAGCGGCTGGCTTTTGTGGCGTCGGCGTTTTCGGGAAGGGAGCGGCCGTCACCGGCGGTGTCCAG-3′
Subcloning
    NheI-HA-GGGG-Abi1-FWD 5′-GGGGGCTAGCACCATGTACCCATACGATGTTCCAGATTACGCGGGCGGTGGCGGTGCAGAGCTGCAGATGTTACTAGAGG-3′
    Abi1-REV-XhoI 5′-GGGGCTCGAGTTAATCAGTATAGTGCATGATTGATTCAAC-3′
    XbaI-CIN85-FWD 5′-ATGGTGGAGGCCATAGTGGAGTTT-3′
    CIN85-HA-REV-BamHI 5′-ATGGGATCCTCAGGCGTAGTCGGGCACGTCGTAGGGGTATTTTGATTGTAGAGCTTTCTTTATG-3′
Recombinant virus construction
    UL135-Fwd-63nt 5′-GTGTTTGGACAATAAACACATTCCTTGCCAAAAAATGACGTTTCCAGAAATCCAAGGCATAAATGTCCGTACACCGGCC-3′
    Myc-REV-UL135 5′-GAGGGAAGGCGTGTGCTGCTATACAACTGTACAACGGACGCGCTCGCTGTTTCGGTCTCACAGATCCTCTTCTGAGATGA-3′
    UL135-GalK-ins-FWD 5′-AAAAGGCGGTGCAGAGCGTCATGAAGGACGCCGAGTCAATGCAGATGACCCCTGTTGACAATTAATCATCGGCA-3′
    UL135-GalK-ins-REV 5′-GTGTGCTGCTATACAACTGTACAACGGACGCGCTCGCTGTTTCGGTCTCATCAGCACTGTCCTGCTCCTT-3′
    UL135-3xFLAG-FWD 5′-AAAAGGCGGTGCAGAGCGTCATGAAGGACGCCGAGTCAATGCAGATGACCGATTATAAAGATGATGATGATAAA-3′
    UL135-3xFLAG-REV 5′-GTGTGCTGCTATACAACTGTACAACGGACGCGCTCGCTGTTTCGGTCTCACTTGTCGTCGTCGTCCTTGTAGTC-3′
a

PHOS, 5′ phosphorylation of oligonucleotide.