Table 1.
Matched-pairs feature selection survey. This table lists the matched-pairs feature selection methods in this article with its method name (second column), software (third column) and literature (fourth column) through three groups: test statistic, CLR, and boosting strategy.
Method | Softwarea | Literature | |
---|---|---|---|
Test statistic | Paired t-test | R package “PairedData” | Hsu et al. [66] |
Modified paired t-test | – | Tan et al. [58] | |
Fold-change paired t-test | – | Cao et al. [62] | |
Conditional logistic regression | RP-CLR | R package “RPCLR” | Balasubramanian et al. [64] |
PCU-CLR | R package “penalized” | Qian et al. [15] | |
BVS-CLR | R package “coda” | Asafu-Adjei et al. [65] | |
Boosting strategy | WL2Boost | Source code in paper | Adewale et al. [18] |
1-step PQLBoost | – | Adewale et al. [18] |
Using “–” if no specific software found for the method.