Table 2.

Number of SNPs per chromosome retained after quality control

Chromosome	Number of SNPs	Chromosome	Number of SNPs	Chromosome	Number of SNPs
1	43,024	11	6,399	21	3,979
2	26,599	12	5,201	22	1,761
3	22,625	13	3,455	23	3,095
4	20,621	14	6,089	24	3,356
5	13,883	15	2,859	25	514
6	11,025	16	171	26	2,033
7	10,787	17	3,198	27	2,336
8	8,468	18	3,637	28	2,098
9	8,888	19	3,885
10	8,496	20	3,539