Table 5. Candidate genes related to anthocyanin accumulation in pepper.

Classification	Gene name	Gene_ID	Start (bp)	End (bp)	Description
Structural genes	4CL2	CA10g04060	18,570,738	18,572,196	4-coumarate—CoA ligase 2 Nicotiana tabacum [50]
	5AT	CA10g03640	12,745,342	12,746,112	Anthocyanin 5-aromatic acyltransferase Gentiana triflora
	3AT	CA10g03760	14,981,576	14,981,851	Anthocyanidin 3-O-glucoside 6”-O-acyltransferase Perilla frutescens
	3GGT	CA10g03880	16,367,650	16,369,032	Anthocyanidin 3-O-glucoside 2”-O-glucosyltransferase Ipomoea nil [51]
	UGT73C3	CA10g12640	194,040,338	194,041,813	UDP-glycosyltransferase 73C3 Arabidopsis thaliana
	UGT73C5	CA10g12650	194,053,311	194,053,472	UDP-glycosyltransferase 73C5 Arabidopsis thaliana
	CYP76A2	CA10g12890	195,250,338	195,253,243	Cytochrome P450 76A2 Solanum melongena
Transcription factors	MYB39	CA10g03650	13,533,765	13,535,787	Transcription factor MYB39 Arabidopsis thaliana
	nol10	CA10g12710	194,493,711	194,494,820	Nucleolar protein 10 Danio rerio
	APL	CA10g12810	194,789,125	194,791,433	MYB family transcription factor APL Arabidopsis thaliana [52]
Anthocyanin accumulation in response to stress	At5g45960	CA10g03810	15,633,033	15,636,114	GDSL esterase/lipase At5g45960 Arabidopsis thaliana
Genes with non-synonymous SNPs	ARA12	CA10g12840	194974062	194974736	Subtilisin-like protease Arabidopsis thaliana [53]