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. 2018 Jul 20;11(3):72. doi: 10.3390/ph11030072

Table 3.

Interactions between ligands with therapeutic target XO (organism Boss taurus).

Amino Acid Distance (Å) Type Binding Free Energy (kcal/mol)
2 vs. XO Leu873 3.5408 Pi-Sigma −6.76
4.8720 Pi-Alkyl
Ser876 2.3000 Conventional Hydrogen Bond
Phe914 3.7825 Pi-Pi Stacked
Thr1010 2.0916 Conventional Hydrogen Bond
Val1011 5.2238 Pi-Alkyl
5.4506 Pi-Alkyl
Leu1014 5.0207 Pi-Alkyl
2.8423 Pi-Sigma
11 vs. XO Phe914 3.6159 Pi-Pi Stacked −4.4
Phe1009 5.4325 Pi-Pi T-shaped
Thr1010 2.0504 Conventional Hydrogen Bond
2.8382 Conventional Hydrogen Bond
Ala1078 4.9487 Pi-Alkyl
Ala1079 3.6445 Pi-Sigma
Glu1261 1.9196 Conventional Hydrogen Bond
Leu873 4.4308 Alkyl
4.9122 Alkyl
Phe914 3.5349 Pi-Pi Stacked
12 vs. XO Phe1009 4.8397 Pi-Pi Stacked −7.13
Val1011 4.4798 Alkyl
Ala1078 4.9457 Pi-Alkyl
4.1350 Alkyl
Ala1079 4.1423 Pi-Alkyl
HPX vs. XO Glu802 3.2579 Conventional Hydrogen Bond −5.65
Arg880 3.0805 Conventional Hydrogen Bond
Phe914 3.4234 Pi-Pi Stacked
3.8092 Pi-Pi Stacked
Phe1009 4.7907 Pi-Pi T-shaped
5.2023 Pi-Pi T-shaped
Thr1010 3.1183 Conventional Hydrogen Bond
2.8251 Conventional Hydrogen Bond
Ala1078 4.6549 Pi-Alkyl
Ala1079 3.9407 Pi-Sigma
4.8965 Pi-Alkyl
FBX vs. XO Glu802 1.9544 Conventional Hydrogen Bond −6.1
Leu873 3.7514 Pi-Sigma
Ser876 2.8449 Conventional Hydrogen Bond
Phe914 3.8848 Pi-Pi Stacked
Phe1005 3.8139 Pi-Alkyl
4.6647 Pi-Alkyl
Phe1009 4.4818 Pi-Pi T-shaped
5.5513 Pi-Sulfur
Val1011 4.8667 Pi-Alkyl
Leu1014 4.2479 Pi-Alkyl
Ala1078 4.4684 Pi-Alkyl
Ala1079 4.7224 Pi-Alkyl
3.7013 Alkyl