Table 3.

Label assignments for clonal inference comparison.

Clone Type	ImmuneDB	MiXCR
Identical	10,788	10,788
Subset	1,665	2,819
Superset	1,155	726
Intersecting	22	12
Superset & Intersecting	72	74
Disjoint	36	36

Clonal labels when comparing methods of clonal inference between ImmuneDB and MiXCR. Identical indicates the same set of clones was identified by both methods, subset/superset means the clone constructed by the associated pipeline was a subset/superset of one assigned by the other pipeline, and intersecting means there some sequences from a clone assigned by one pipeline that overlapped sequences assigned by the other pipeline.