Table 3.
Most conserved five motifs in DREB2 proteins in sorghum, rice, and Arabidopsis
| Motif no. | Motif width | Detected sites | Motif sequence | Motif-domain associationa |
|---|---|---|---|---|
| 1 | 41 | 19 | GKGGPENAQCSYRGVRQRTWGKWVAEIREPNRGARLWLGTF | AP2 domain (PF00847) |
| 2 | 28 | 18 | PTAEEAALAYDEAARALYGPDARLNLPH | Not found |
| 3 | 11 | 14 | PAKGSKKGCMK | Not found |
| 4 | 21 | 12 | RKRNGPTSVAEIJKRWKEYNE | Not found |
| 5 | 14 | 7 | DDCFDIBELLEMJN | Not found |
A set of 19 DREB2 sequences were analyzed using MEME server
aMotifs are searched in Pfam database to figure out their associations with protein domains