REAGENT or RESOURCE | SOURCE | IDENTIFIER |
---|---|---|
Antibodies | ||
Rabbit polyclonal GFP | ABCAM | #AB6556; RRID: AB_305564 |
Rabbit polyclonal anti-CENP-OP | Generated in house | N/A |
Mouse monoclonal anti-CENP-P | ABCAM | #AB66058; RRID: AB_1523338 |
Goat polyclonal anti-CENP-QU | Generated in house | N/A |
Mouse monoclonal anti-CENP-Q | ABCAM | #AB57539; RRID: AB_940733 |
Mouse monoclonal anti-CENP-R | ABCAM | #AB57098; RRID: AB_304751 |
Rabbit polyclonal anti-CENP-HK | Generated in house | #SI0930 |
Mouse polyclonal anti-CENP-A | Gene Tex | #GTX13939; RRID: AB_369391 |
Mouse monoclonal anti-CENP-A | ABCAM | #AB13939; RRID: AB_300766 |
Rabbit polyclonal anti-CENP-C(23-410) | Trazzi et al., 2009 | #SI410 |
Rabbit polyclonal anti-CENP-N(1-212) | Generated in house | N/A |
Rabbit polyclonal anti-CENP-E | Meraldi Lab; Meraldi et al., 2004 | N/A |
Human anti-centromere (CREST) | Antibodies Inc. | Cat#15-234-0001; RRID: AB_2687472 |
Bacterial and Virus Strains | ||
E.coli: BL21(DE3)-RIL strain | Agilent Technologies | #230240 |
Chemicals, Peptides, and Recombinant Proteins | ||
HRV 3C Prescision Protease | Generated in house | N/A |
TEV Protease | Generated in house | N/A |
Lambda phosphatase | Generated in house | N/A |
Protease-inhibitor mix HP Plus | Serva | Cat#39107 |
Sortase A delta 59 (S.aureus) | Hidde Ploegh Lab | Addgene:Cat#51139 |
Alexa Fluor 488 C5 maleimide Protein labeling kit | ThermoFisher | #A10254 |
Alexa Fluor 647 C2 maleimide Protein labeling kit | ThermoFisher | #A20347 |
Alexa Fluor 405 Carboxylic acid, succinimidyl ester Protein labeling kit | ThermoFisher | #A30000 |
NHS-Rhodamine labeling kit | Thermo Scientific | #46406 |
FAM-LPETGG | Genscript | N/A |
PhosSTOP phosphatase inhibitor | Roche | Cat#04906845001 |
(+)-S-Trityl-L-cysteine (STLC) | Sigma Aldrich | #164739 |
RO-3306 | Millipore | #217699 |
MG-132 | Calbiochem | CAS 133407-82-6 |
MG-132 | Sigma | SML1135 |
Uranyl formate | SPI Supplies | CAS#16984-59-1 |
Fetal bovine serum (FBS) | Clonetech | #631107 |
Fetal bovine serum (FBS) | Sigma | Cat:f7524 Batch:111M3395 |
Zeocin | Invitrogen | Cat#R25001 |
L-glutamine | PAN Biotech | P04-80100 |
Nocodazole | Sigma | Cat#M1404 |
CENP-C(1-544) | Musacchio Lab; Screpanti et al., 2011 | N/A |
CENP-HIKM | Musacchio Lab, Basilico et al., 2014 | N/A |
CENP-LN | Musacchio Lab, Pentakota et al., 2017 | N/A |
CENP-CHIKM | Musacchio Lab; Klare et al. 2015 | N/A |
NDC80 complex | Musacchio Lab; Huis In 't Veld et al., 2016 | N/A |
MIS12 complex | Musacchio Lab; Petrovic et al., 2014 | N/A |
KNL1 complex | Musacchio Lab; Petrovic et al., 2014 | N/A |
CENP-A NCP | Musacchio Lab; Weir et al., 2016 | N/A |
Tubulin (in TIRF experiment) purified from pig brains | N/A | N/A |
poly-L-lysine-poly-ethylene-glycol-biotin | SUSOS-AG | PLL (20) -g[3.5]- PEG(2)/PEGbi) |
streptavidin | Sigma | S4762; CAS#: 9013-20-1 |
GMP-CPP | Jena Biosciences | GpCpp, NU-405S CAS#: 14997-54-7 |
Porcine tubulin (biotin labelled) | Cytoskeleton | Cat. # T333P-A |
HiLyte 647 labeled porcine tubulin | Cytoskeleton | Cat. # TL670M-A |
Paclitaxel (Taxol) | Sigma | T7402; CAS#: 33069-62-4 |
Glucose oxidase | Sigma | G7141; CAS#:9001-37-1 |
Catalase | Sigma | SRE0041 CAS#:9001-05-2 |
DAPI | Sigma | D9542 |
PenStrep | Gibco | 15-140 |
Fugene6 | Promega | E2691 |
Oligofectamine | Invitrogen | 12252011 |
Critical Commercial Assays | ||
QIAquick Kit | Qiagen | 28704 |
Mini-prep kit | Qiagen | 27104 |
Maxi-prep kit | Qiagen | 10023 |
Experimental Models: Cell Lines | ||
Trichoplusia ni:BTI-Tnao38 | Garry W Blissard Lab | N/A |
S.frugiperda:Sf9 cells | ThermoFisher | Cat#12659017 |
HeLa cells | IEO Milan | N/A |
Human: Flp-IN T-Rex HeLa | S.S. Taylor, University of Manchester | N/A |
Human: Flp-In T-Rex HeLa-GFP-CENP-O | This paper | N/A |
Human: Flp-In T-Rex HeLa-GFP-CENP-P | This paper | N/A |
Human: Flp-In T-Rex HeLa-GFP-CENP-P(F116G) | This paper | N/A |
Human: Flp-In T-Rex HeLa-GFP-CENP-Q | This paper | N/A |
Human: HeLa K cells | Meraldi Lab | N/A |
Human: HeLa K-CENP-Q-eGFP | This paper | N/A |
Human: HeLa K-CENP-Q(Ndc80(1-80))-eGFP | This paper | N/A |
Human: Flp-In T-Rex HeLa-GFP-CENP-U | This paper | N/A |
Human: Flp-In T-Rex HeLa-GFP-CENP-R | This paper | N/A |
Experimental Models: Organisms/Strains | ||
E.coli: BL21(DE3)-RIL strain | Agilent Technologies | #230240 |
E.coli: BL21CodonPlus(DE3)-RIL strain | Agilent Technologies | #230280 |
Oligonucleotides | ||
CENP-O siRNA: 5’-UAGGAGACCAGACUCAUAU-3’ |
Dharmacon | |
CENP-P SMARTpool: 5’-GUGCAAGAGAGAACAACUA-3’ 5’-AGUCAUUGUUUGGAGGAUA-3’ 5’-UAUCGUAAGCGCACGUUUA-3’ 5-CCUAAGUGCUAUAUCGAUC-3’ |
Dharmacon | |
CENP-P siRNA 5’-GAACCCTGGTAGGACTGCTTGGAAT-3’ |
Invitrogen Stealth; Amaro et al., 2010 | |
CENP-Q SMARTpool: 5’-GAGUUAAUGACUGGGAAUA-3’, 5’-AUGGAAAGGGCACGAGACA-3’ 5’-ACAAAGCACACUAACCUAA-3’ 5’-UGUCAGAGAAAUAAGGUUAG-3’ |
Dharmacon | |
CENP-Q siRNA: 5‘-GGUCUGGCAUUACUACAGGAAGAAA-3‘ |
Invitrogen Stealth; Bancroft et al., 2015 | |
CENP-R SMARTpool: 5’-GAAGUUGGAUGGUCUGUUA-3’ 5’-UGACAGCUAUGAAUUCCUU-3’ 5’-UAAGUAGUAUACAGGCUUU-3’ 5’-GAAUUCAUGAUGUUGCUAU-3’ |
Dharmacon | |
CENP-H siRNA: 5’-CUAGUGUGCUCAUGGAUAA-3’ |
Dharmacon | |
CENP-L siRNA: 5’-UUUAUCAGCCACAAGAUUA-3’ |
Dharmacon | |
CENP-N SMARTpool: 5’-CUACCUACGUGGUGUUACUA-3’ 5’-GUUCAGCACUUGAUCCAUC-3’ 5’-AUACACCGCUUCUGGGUCA-3’ 5’-ACACAAAGCCAAACCAGUA-3’ |
Dharmacon | |
Recombinant DNA | ||
pGEX-2rbs | Musacchio Lab | N/A |
pGEX-2rbs-CENP-R | This study | N/A |
pGEX-2rbs-CENP-C(1-544) | Screpanti et al., 2011 | N/A |
pGEX-2rbs-CENP-C(1-544)-SNAP | This study | N/A |
MultiBac | Geneva Biotech | N/A |
pFL-6His-CENP-P:CENP-O | This study | N/A |
pFL-6His-CENP-P(F116G):CENP-O | This study | N/A |
pFL-6His-CENP-Q:CENP-U | This study | N/A |
pUCDM-CENP-R | This study | N/A |
pLIB | Peters Lab. | Addgene #80610 |
pBIG1A | Peters Lab. | Addgene #80611 |
pLIB CENP-O | This study | N/A |
pLIB CENP-P | This study | N/A |
pLIB CENP-Q | This study | N/A |
pLIB CENP-Q(68-C) | This study | N/A |
pLIB CENP-U | This study | N/A |
pLIB CENP-R | This study | N/A |
pBIG1A with CENP-OPQUR (His-CENP-Q) | This study | N/A |
pBIG1A with CENP-OPQ(68-C)UR (His-CENP-Q) | This study | N/A |
pCDNA 5/FRT/TO | Invitrogen | Cat#V6520-20 |
pCDNA 5/FRT/TO EGFP | Musacchio Lab; Krenn et al., 2012 | N/A |
pCDNA 5/FRT/TO EGFP-CENP-O | This study | N/A |
pCDNA 5/FRT/TO EGFP-CENP-P | This study | N/A |
pCDNA 5/FRT/TO EGFP-CENP-P(F116G) | This study | N/A |
pCDNA 5/FRT/TO EGFP-CENP-Q | This study | N/A |
pCDNA 5/FRT/TO EGFP-CENP-U | This study | N/A |
pCDNA 5/FRT/TO EGFP-CENP-R | This study | N/A |
peGFP-C1 | Clontech | #6085-1 |
pCENP-Q-eGFP | McAinsh Lab; Bancroft et al., 2015 | N/A |
pCENP-Q(NDC80(1-80))-eGFP | This study | N/A |
Software and Algorithms | ||
GraphPad Prism 6.0 | GraphPad software | http://www.graphpad.com |
Imaris 7.3.4 32-bit | Bitplane | http://www.bitplane.com/imaris |
ImageJ 1.46 r | NIH | http://imageJ.nih.gov/ij/ |
SoftWorx | Applied Precision | NA |
Image Lab | Bio-rad | https://www.bio-rad.com/de-de/product/image-lab-software?ID=KRE6P5E8Z |
UCSF Chimera | Pettersen et al., 2004 | http://www.cgl.ucsf.edu/chimera |
SPHIRE suit | Moriya et al., 2017 | http://www.sphire.mpg.de |
SEDFIT | Schuck, 2000 | http://www.analyticalultracentrifugation.com/default.htm |
SEDNTERP | Laue et al., 1992 | http://bitcwiki.sr.unh.edu/index.php/Main_Page |
GUSSI | Chad Brautigam | http://biophysics.swmed.edu/MBR/software.html |
PrDOS | Ishida and Kinoshita, 2007 | http://prdos.hgc.jp/cgi-bin/top.cgi |
COILS | Lupas et al., 1991 | https://embnet.vital-it.ch/software/COILS_form.html |
Deposited Data | ||
Mendeley data | This paper | https://doi.org/10.17632/yv552m8s98.1 |