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. 2018 Sep 17;19(9):2794. doi: 10.3390/ijms19092794

Table 1.

SNPs stably detected in different environments and for various traits.

LG Position (bp) Env. Traits PVE (%) LG Position (bp) Env. Traits PVE (%)
1 1,700,170 SY CNB 7.00 5 17,411,684 SY SNMM 7.29
CN 7.10 SWMM 6.79
1 1,994,183 SY YB 8.68 6 3,404,764 SY YB 10.65
YMB 7.41 MCNB 7.33
1 4,450,107 SY YB 7.55 YMB 11.15
YMB 6.99 6 3,790,583 SY TWB 7.13
1 6,149,415 SY TMM 7.61 WMB 8.28
WMM 6.58 6 5,995,560 SY YB 10.91
1 8,185,969 SY YB 7.03 CNB 6.99
YMB 7.26 YMB 11.32
1 9,906,190 SY YB 6.67 6 9,021,538 SY YB 8.12
YMB 6.88 YMB 8.34
1 11,118,941 SY SNMB 6.32 6 9,971,772 NN TMM 6.29
SWMB 6.50 WMM 6.39
1 17,291,730 SY YB 8.73 6 14,154,329 SY YB 7.29
YMB 9.10 YMB 6.59
2 1,201,448 SY YB 8.76 6 14,581,641 SY LCNM 10.29
YMB 9.15 CNM 6.41
YB 6.41 6 14,701,957 WH TMM 7.09
2 5,260,400 SY YB 7.08 WMM 6.96
YMB 7.87 6 15,551,496 SY RMM 7.63
2 6,057,670 NN TMM 9.46 SNMM 6.13
WMM 11.33 6 21,992,131 SY YB 10.89
2 7,236,995 SY YB 6.09 YMB 10.77
YMB 6.11 7 6,763,527 SY RMB 6.69
2 8,388,879 NN TWB 6.32 SWMB 7.65
TWB 7.24 7 1,702,826 NN CNM 9.42
2 9,244,103 SY TMM 6.04 WH CNM 6.66
WH WMM 9.85 8 1,398,196 SY YB 11.12
TMM 9.25 YMB 11.99
2 11,245,765 SY TMM 7.95 8 1,668,572 SY YB 7.38
WMM 7.56 SNMM 9.89
2 15,016,082 SY YB 7.51 YM 6.66
YMB 7.78 SWMM 8.84
2 17,451,873 SY SNMB 6.47 8 21,325,953 SY YB 8.97
RMM 9.17 YMM 7.68
SWMM 14.89 9 1,007,867 SY RMM 8.57
SWMB 6.83 SNMM 8.58
SNMM 15.13 9 954,526 WH SNMM 7.48
3 4,840,197 SY LCNM 6.12 WMM 8.03
CNM 6.42 TMM 7.80
3 13,198,513 SY YB 6.68 10 1,647,805 SY CNB 12.64
YMB 7.24 CN 6.14
3 14,990,430 SY YB 8.68 10 3,823,922 SY CNB 7.43
CNB 9.34 MCNB 6.85
MCNB 9.40 10 7,418,158 NN TMM 6.24
YMB 8.81 WMM 6.31
3 16,939,689 SY YB 6.70 10 8,305,398 SY YB 7.76
YMB 6.63 YMB 7.89
3 20,410,997 SY TMM 6.47 10 10,792,029 SY YB 7.29
WMM 6.79 YMB 6.60
3 20,876,555 SY YB 10.76 10 12,008,065 SY RMM 6.83
YMB 11.09 SNMM 6.61
3 20,878,243 SY CNB 8.06 10 14,650,964 SY YB 6.81
MCNB 8.44 YMM 7.50
3 24,164,350 SY TMM 6.84 10 15,097,365 SY TMM 7.41
WMM 6.43 WMM 6.90
4 2,505,014 SY YB 7.98 11 6,996,833 SY SNMM 6.53
YMB 7.82 SWMM 7.78
4 6,419,408 SY WMM 6.99 11 11,923,935 SY YB 7.10
CPMM 6.25 YMB 7.77
4 14,211,075 SY YB 7.47 11 14,876,966 SY YB 6.33
YMB 6.10 YMB 6.91
5 202,984 SY YB 9.50 11 15,137,600 SY TMM 7.52
YMM 6.92 WMM 6.55
5 2,854,336 NN YM 7.85 12 328,609 SY YM 7.53
CNM 8.20 YMM 7.78
5 5,479,753 SY YB 7.61 12 2,356,955 SY YB 6.24
CNB 8.89 YMB 6.72
YMB 7.81 12 4,200,237 SY YB 6.60
CNM 13.68 YMB 7.21
NN CNM 17.90 12 4,895,688 SY SNMM 8.67
5 6,737,753 SY CNB 8.89 SWMM 6.18
CNM 13.68 13 2,772,629 SY YB 8.17
NN CNM 17.90 YMB 8.49
5 6,738,735 NN LCNM 7.01 14 194,410 SY YB 6.20
YMB 6.70
CNM 13.30 15 2,174,040 SY YB 7.20
SY LCNM 13.03 YMB 7.22
WH CNM 14.79 15 2,372,143 WH YB 6.29
5 6,757,688 NN SNMB 8.02 CNM 7.03
SWMB 10.88 YM 6.01
5 9,869,746 NN RMB 6.54 15 3,989,016 SY YB 6.72
SWMB 6.08 YMB 6.69
5 11,806,702 SY TWB 6.29 16 555,771 WH TMM 7.55
TWB 6.34 WMM 6.40
5 15,855,382 WH SNMM 6.76 16 1,633,469 SY YB 7.97
TMM 9.11 YMB 8.17
WMM 8.68 16 2,989,809 SY CNB 9.26
NN WMM 6.23 MCNB 8.26
5 17,340,920 SY CNB 8.64
MCNB 10.45

LG = Linkage group; Env. = Environment; PVE = Phenotypic variance explained; SY = Sanya; NN = Nanning; WH = Wuhan.