Table 4.
Number of genes associated with general COGs functional categories
| Code | Value | %age | Description |
|---|---|---|---|
| J | 222 | 6.81% | Translation, ribosomal structure and biogenesis |
| A | 1 | 0.03% | RNA processing and modification |
| K | 179 | 5.49% | Transcription |
| L | 112 | 3.43% | Replication, recombination and repair |
| B | 1 | 0.03% | Chromatin structure and dynamics |
| D | 32 | 0.98% | Cell cycle control, cell division, chromosome partitioning |
| V | 54 | 1.66% | Defense mechanisms |
| T | 134 | 4.11% | Signal transduction mechanisms |
| M | 195 | 5.98% | Cell wall/membrane/envelope biogenesis |
| N | 80 | 2.45% | Cell motility |
| U | 35 | 1.07% | Intracellular trafficking, secretion, and vesicular transport |
| O | 108 | 3.31% | Posttranslational modification, protein turnover, chaperones |
| C | 197 | 6.04% | Energy production and conversion |
| G | 216 | 6.62% | Carbohydrate transport and metabolism |
| E | 264 | 8.10% | Amino acid transport and metabolism |
| F | 84 | 2.58% | Nucleotide transport and metabolism |
| H | 179 | 5.49% | Coenzyme transport and metabolism |
| I | 108 | 3.31% | Lipid transport and metabolism |
| P | 174 | 5.34% | Inorganic ion transport and metabolism |
| Q | 73 | 2.24% | Secondary metabolites biosynthesis, transport and catabolism |
| R | 268 | 8.22% | General function prediction only |
| S | 138 | 4.23% | Function unknown |
| – | 779 | 23.89% | Not in COGs |
The total is based on the total number of protein coding genes (3261) in the genome