Table 5. Phytophthora cactorum genes in orthogroups shared with characterized P. infestans RxLR candidates.
P. cactorum gene ID |
Contig |
P. infestans Avr gene |
P. infestans
gene ID |
Orthogroup | Orthogroup contents | Notes |
---|---|---|---|---|---|---|
g15126.t1 | contig_485 | Avr1 | PITG_16663 | OG0000777 | Pcac(2):Pinf(2):Ppar(4):Pcap(4):Psoj(2) | TLLR at RxLR motif location |
g16706.t1 | contig_608 | Avr1 | PITG_16663 | OG0000777 | Pcac(2):Pinf(2):Ppar(4):Pcap(4):Psoj(2) | |
g5545.t1 | contig_94 | Avr3b | PITG_15732 | OG0013112 | Pcac(1):Pinf(1):Ppar(1):Pcap(0):Psoj(0) | NUDIX hydrolase domain (IPR000086) |
g4951.t1 | contig_80 | Avr4 | PITG_07387 | OG0011587 | Pcac(1):Pinf(1):Ppar(2):Pcap(0):Psoj(0) | |
g6635.t1 | contig_121 | Avrblb1 | PITG_21388 | OG0001713 | Pcac(2):Pinf(2):Ppar(4):Pcap(0):Psoj(0) | Truncated protein |
g6663.t1 | contig_121 | Avrblb1 | PITG_21388 | OG0001713 | Pcac(2):Pinf(2):Ppar(4):Pcap(0):Psoj(0) | |
g15879.t1 | contig_543 | AvrSmira2 | PITG_07558 | OG0000427 | Pcac(2):Pinf(4):Ppar(5):Pcap(3):Psoj(7) | |
g18867.t1 | contig_844 | AvrSmira2 | PITG_07558 | OG0000427 | Pcac(2):Pinf(4):Ppar(5):Pcap(3):Psoj(7) |