Table 2. Composition of subunits.
Subunit | human/bovine | Chain | Total residues/ range built |
Modelled with side chains |
Modelled as poly-alanine |
[%] residues modelled |
[%] with side chains |
[%] unknown |
---|---|---|---|---|---|---|---|---|
central subunits | ||||||||
NUAM | NDUFS1/ 75 kDa |
A | 694/ 1–691 |
1–691 | 0 | 99 | 99 | 1 |
NUBM | NDUFV1/ 51 kDa |
B | 470/ 15–457 |
15–437 | 437–457 | 95 | 90 | 6 |
NUCM | NDUFS2/ 49 kDa |
C | 444/ 28–443 |
58–67 77–443 |
28–57 68–76 |
93 | 85 | 7 |
NUGM | NDUFS3/ 30 kDa |
G | 251/ 1–232 |
30–189 | 1–29 190–232 |
92 | 64 | 8 |
NUHM | NDUFV2/ 24 kDa |
H | 215/ 3–187 |
23–187 | 3–22 | 86 | 78 | 14 |
NUIM | NDUFS8/ TYKY |
I | 198/ 19–198 |
26–198 | 19–26 | 91 | 87 | 9 |
NUKM | NDUFS7/ PSST |
K | 183/ 15–183 |
15–183 | 0 | 92 | 92 | 8 |
NU1M | NU1M/ ND1 |
1 | 341/ 1–340 |
1–179 184–205 217–251 268–340 |
180–183 206–216 252–267 |
100 | 91 | 0 |
NU2M | NU2M/ ND2 |
2 | 469/ 1–85 99–465 |
1–25 53–85 99–415 |
26–52 416–465 |
96 | 80 | 4 |
NU3M | NU3M/ ND3 |
3 | 128/ 1–34 49–124 |
1–34 49–118 |
119–124 | 81 | 77 | 19 |
NU4M | NU4M/ ND4 |
4 | 486/ 7–481 |
85–189 201–434 |
7–84 190–200 435–481 |
98 | 70 | 2 |
NU5M | NU5M/ ND5 |
5 | 655 5–479 489–652 |
28–436 457–474 568–592 614–652 |
5–27 437–456 475–479 489–567 593–613 |
98 | 75 | 2 |
NU6M | NU6M/ ND6 |
6 | 185 2–184 |
2–77 160–184 |
78–159 | 99 | 55 | 1 |
NULM | NULM/ ND4L |
L | 89 1–86 |
1–86 | 0 | 97 | 97 | 3 |
accessory subunits peripheral arm | ||||||||
NUEM | NDUFA9/ 39 kDa |
E | 355 17–334 |
17–334 | 0 | 82 | 82 | 18 |
NUFM | NDUFA5/ B13 |
F | 136 13–131 |
34–131 | 13–33 | 88 | 72 | 12 |
NUMM | NDUFS6/ 13 kDa |
M | 119 13–117 |
43–117 | 13–42 | 88 | 75 | 12 |
NUYM | NDUFS4/ 18 kDa |
Y | 137 19–133 |
19–133 | 0 | 84 | 84 | 16 |
NUZM | NDUFA7/ B14.5a |
Z | 182 30–166 |
0 | 30–166 | 75 | 0 | 25 |
N7BM | NDUFA12/B17.2 | h | 137 6–135 |
6–135 | 0 | 95 | 95 | 5 |
NB4M | NDUFA6/ B14 |
P | 123 3–118 |
3–118 | 0 | 94 | 94 | 6 |
ACPM1 | NDUFAB1/SDAP | O | 84 4–80 |
4–80 | 0 | 92 | 92 | 8 |
NI8M | NDUFA2/ B8 |
f | 86 5–84 |
5–84 | 0 | 93 | 93 | 7 |
Accessory subunits PP module | ||||||||
NUPM | Ndufa8/ pgiv |
U | 171 10–167 |
16–142 | 10–15 143–167 |
92 | 74 | 8 |
NUJM | NDUFA11/B14.7 | J | 197 18–157 |
18–133 | 134–157 | 71 | 59 | 29 |
NB6M | NDUFA13/B16.6 | W | 122 3–120 |
14–120 | 3–13 | 97 | 88 | 3 |
NIPM | NDUFS5/ 15 kDa |
9 | 88 8–66 |
14–66 | 08–13 | 67 | 60 | 33 |
NUXM | -/- | X | 168 4–120 |
72–96 | 4–71 97–120 |
70 | 15 | 30 |
NI9M | NDUFA3/ B9 |
g | 66 3–62 |
3–62 | 91 | 91 | 9 | |
NIMM | NDUFA1/ MWFE |
D | 86 1–80 |
1–58 | 59–80 | 93 | 67 | 7 |
NEBM | NDUFC2/ B14.5b |
b | 73 1–64 |
1–64 | 87 | 0 | 13 | |
accessory subunits PD module | ||||||||
NESM | NDUFB11/ESSS | S | 204 29–187 |
29–187 | 78 | 0 | 22 | |
NIAM | NDUFB8/ ASHI |
a | 125 11–110 |
11–110 | 80 | 0 | 20 | |
NUNM | NDUFB5/ SGDH |
n | 119 23–115 |
23–115 | 78 | 0 | 22 | |
NB2M | NDUFB3/ B12 |
c | 59 8–49 |
31–49 | 8–30 | 71 | 32 | 29 |
NB5M | NDUFB4/ B15 |
j | 92 3–75 |
16–41 | 3–15 42–75 |
82 | 27 | 18 |
NB8M | NDUFB7/ B18 |
8 | 98 3–84 |
3–80 | 81–84 | 84 | 80 | 16 |
ACPM2 | NDUFAB1/SDAP | Q | 88 3–87 |
3–87 | 0 | 97 | 97 | 3 |
NIDM | NDUFB10/PDSW | d | 91 3–91 |
3–91 | 0 | 98 | 98 | 5 |
NI2M | NDUFB9/ B22 |
R | 108 6–107 |
6–98 | 99–107 | 94 | 86 | 6 |
NUUM | NDUFB2/ AGGG |
e | 89 6–50 |
6–50 | 51 | 0 | 49 |