Table 3.
Potential candidate genes from the trichome shape QTL on chromosome VII.
| Solyc ID | Annotation | LA1777 leaves | LA1777 trich. | LA4024 leaves | LA4024 trich. | Leaves/trich. LA1777a | Leaves/trich. LA4024a | 1777/4024b |
|---|---|---|---|---|---|---|---|---|
| 07g062510 | Cytochrome P450 | 31,9 | 555,6 | 16,0 | 88,4 | −4,1 | −2,5 | 2,7 |
| 07g055880 | Unknown Protein | 10,3 | 49,8 | 6,7 | 5,2 | −2,3 | 0,4 | 3,3 |
| 07g056430 | Glutathione S-transferase-like protein | 35,4 | 168,1 | 11,9 | 13,4 | −2,2 | −0,2 | 3,7 |
| 07g053280 | Ketol-acid reductoisomerase | 429,1 | 1359,6 | 447,2 | 404,6 | −1,7 | 0,1 | 1,7 |
| 07g053540 | Fasciclin-like arabinogalactan protein 4 | 61,7 | 194,6 | 91,3 | 102,8 | −1,7 | −0,2 | 0,9 |
| 07g054450 | Transcription factor (fragment) | 17,7 | 50,5 | 33,5 | 32,6 | −1,5 | 0,0 | 0,6 |
| 07g053830 | Mitochondrial ADP/ATP carrier proteins | 53,8 | 150,7 | 50,8 | 54,5 | −1,5 | −0,1 | 1,5 |
| 07g056270 | Receptor-like protein kinase | 66,0 | 143,9 | 39,9 | 98,2 | −1,1 | −1,3 | 0,6 |
The values in columns 3–6 are normalized fluorescence data from transcriptome microarray published by Balcke et al. (2017). alog2 fold-change between leaves and trichomes in S. habrochaites LA1777 (column 7) and S. lycopersicum (column 8). blog2 fold change of the expression in trichomes of S. habrochaites compared to the expression in trichomes of S. lycopersicum.