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. 2018 Sep 26;9:1329. doi: 10.3389/fphys.2018.01329

Table 1.

Summary of the WES analysis in families 1–3.

Patient 1_II.11
1_III.1 0
2_II.5
2_II.6
2_III.6
2_III.7
3_II.1
3_II.2
Type of variant SNV Indel SNV Indel SNV Indel SNV Indel SNV Indel SNV Indel SNV Indel SNV Indel
Total number of variants 49953 7942 49610 7948 49531 7991 48192 7593 50611 8083 50284 7942 50070 7963 50544 8006
Variants with an allele frequency <1% 1782 590 1732 588 1761 615 1897 628 2065 671 2223 649 2100 626 1880 600
Exclusion of 5′UTR, 3′UTR and intron locations without local splice effect prediction 954 69 917 77 986 79 1076 79 1189 91 1240 75 1145 97 1011 87
Exclusion of synonymous variants without local splice effect prediction 706 64 679 70 696 75 781 73 839 87 887 69 840 94 716 82
Variants consistent with dominant transmission 1 heterozygous variant in CACNA1S

One heterozygous variant common to all the affected patients (1_III.10, 2_II.5, 2_III.6, 2_III.7, 3_II.1, and 3_II.2) in the genes CACNA1S, was selected for further investigation after exclusion of mutations located in the 5′UTR, 3′UTR, intron, along with synonymous variants without predicted splicing effects.