Table 1.
Phenotypes resulting from the depletion of TETs in ectoderm, mesoderm, and endoderm lineages
Lineage | System | TET isoform | Phenotype | References |
---|---|---|---|---|
Ectoderm | Human ESCs | TET1/2/3 triple knockout | Form fewer PAX6+ neuroectoderm cells | [14] |
Neuron stem cells | Tet1 or Tet2 knockdown | Reduce proliferation of neuron stem cells | [90] | |
Cortex | Tet2 or Tet3 knockdown | Abnormal accumulation of cell clusters along the radial axis in the intermediate zone and ventricular zone | [34] | |
Cerebellar granule cells | Tet1/3 double knockdown | Impair dendritic arborization of cerebellar granule cells | [77] | |
Mouse ESCs | Tet3 knockout | Apoptosis of neuron progenitor cells and reduce terminal differentiated neurons | [24] | |
Neurons | Tet1 knockout | Increase hippocampal long-term depression and impair memory extinction | [75] | |
Neurons | Tet1 overexpression | Promote neurogenesis | [91] | |
Retinal neurons | Tet2/3 double knockout | Defects in retinal cells terminal differentiation | [92] | |
Cortical neurons | Tet2 knockdown | Reduce neuronal cells survival | [93] | |
Head | Tet1 mutation | Defects in neural tube closure | [94] | |
Eye and neural | Tet3 knockdown | Eye malformations and small head | [6] | |
Oligodendrocyte precursor cells | Tet1, Tet2, or Tet3 knockdown | Reduce mature oligodendrocytes | [95] | |
Olfactory sensory neurons | Tet3 overexpression | Disturb axon targeting and olfactory receptor expression | [47] | |
Dental pulp cells | TET1 knockdown | Prevent the proliferation and differentiation of dental pulp cells | [96] | |
Mesoderm | Hematopoietic stem cells | Tet2 knockout | Enhance self-renewal of hematopoietic stem cells, expansion of myeloid progenitors | [97] |
Bone marrow cells | Tet2 knockdown | Enhance self-renewal of hematopoietic stem cells, expansion of myeloid progenitors | [31] | |
Hematopoietic stem cells | Tet2/3 double knockout | Loss of hematopoietic stem cell-derived blood cells | [98] | |
Human ESCs | TET2 knockdown | Impair hematopoietic cell differentiation | [27] | |
T cells | Tet2/3 double knockout | Form more iNKT cell in the young mice, and skew major population to NKT17 cells | [74] | |
Regulatory T cells | Tet2/3 double knockout | Less regulatory T cells in the spleen and lymph nodes | [86] | |
Regulatory T cells | Tet1/2 double knockout | Less regulatory T cells in the spleen and lymph nodes | [83] | |
T cells | Tet2 knockout | Impair Th1 and Th17 cells differentiation and cytokine genes induction | [38] | |
T cell | Tet2 knockout | Promote memory CD8+ T cells differentiation after viral infection | [99] | |
B cells | Tet2/3 double knockout | Block progenitor B cells differentiation and maturation | [7, 61] | |
Mast cells | Tet2 knockout | Impair mast cell differentiation, cytokine production, and proliferation | [85] | |
Erythroid cells | TET2 or TET3 knockdown | Delay differentiation of erythroid progenitors and regulate terminal differentiation | [84] | |
Bone marrow mesenchymal stem cells | Tet1/2 double knockout | Increase self-renewal of bone marrow mesenchymal stem cells and reduce osteogenic differentiation | [53] | |
Smooth muscle cell | TET2 overexpression | Convert fibroblasts to smooth muscle cells | [51] | |
Skeletal muscle myoblasts | Tet2 knockdown | Impair myoblast differentiation | [88] | |
Cardiomyocyte | Tet2 knockdown | Downregulate genes related to cardiac muscle contraction and cardiac muscle fiber development | [10] | |
Endoderm | Intestinal stem cell | Tet1 knockout | Form shorter intestine | [25] |
T84 colon adenocarcinoma cells | Tet1 knockdown | Dysregulate genes related to cell membrane and extracellular space | [100] |