TABLE 1.
p value | Term size | Overlap size | Recall | Precision | Term ID | Domain | Subgraph number | Term name |
---|---|---|---|---|---|---|---|---|
2.05E-29 | 5658 | 483 | 0.442 | 0.085 | G0:0051179 | BP | 2 | Localization |
1.62E-28 | 5444 | 467 | 0.427 | 0.086 | G0:0048518 | BP | 2 | Positive regulation of biological process |
2.27E-28 | 6288 | 518 | 0.474 | 0.082 | G0:0044700 | BP | 2 | Single organism signalling |
3.36E-28 | 6297 | 518 | 0.474 | 0.082 | G0:0023052 | BP | 2 | Signalling |
4.69E-27 | 6392 | 520 | 0.476 | 0.081 | G0:0007154 | BP | 2 | Cell communications |
1.75E-25 | 691 | 114 | 0.104 | 0.165 | G0:0045202 | CC | 29 | Synapse |
2.31E-25 | 3537 | 334 | 0.306 | 0.094 | G0:0031988 | CC | 29 | Membrane-bound vesicle |
2.92E-25 | 4685 | 409 | 0.374 | 0.087 | G0:0048522 | BP | 2 | Positive regulation of cellular process |
3.42E-24 | 3664 | 339 | 0.310 | 0.093 | G0:0031982 | CC | 29 | Vesicle |
7.78E-24 | 10688 | 747 | 0.683 | 0.070 | G0:0005515 | MF | 158 | Protein binding |
2.81E-23 | 2325 | 243 | 0.222 | 0.105 | G0:0032879 | BP | 2 | Regulation of localization |
6.17E-23 | 4103 | 364 | 0.333 | 0.089 | G0:1902578 | BP | 2 | Single-organism localisation |
1.56E-22 | 4637 | 397 | 0.363 | 0.086 | G0:0051234 | BP | 2 | Establishment of localisation |
1.81E-22 | 3565 | 327 | 0.299 | 0.092 | G0:0065008 | BP | 2 | Regulation of biological |
3.19E-22 | 4512 | 388 | 0.355 | 0.086 | G0:0006810 | BP | 2 | Transport |
3.45E-22 | 2788 | 273 | 0.250 | 0.098 | G0:0007166 | BP | 2 | Cell surface receptor signalling pathway |
5.78E-22 | 1051 | 140 | 0.128 | 0.133 | G0:0009611 | BP | 2 | Response to wounding |
7.75E-22 | 939 | 130 | 0.119 | 0.138 | G0:0002684 | BP | 2 | Positive regulation of immune system process |
1.21E-21 | 3663 | 331 | 0.303 | 0.090 | G0:0048583 | BP | 2 | Regulation of response to stimulus |
1.26E-21 | 1190 | 151 | 0.138 | 0.127 | G0:0097458 | CC | 29 | Neuron part |
Data in bold signify the pathways chosen for further analysis.