Table 1. The number of RNA-seq paired-end reads acquired for the three A. gossypii clones (NS, MS, and KR).
| Sample IDa) | Replicate ID | No. of RNA-seq paired-end readsb) | ||
|---|---|---|---|---|
| Raw | Filtered | Mapped to reference | ||
| NS (N) | rep1 | 36,807,970 | 29,952,366 | 23,732,526 |
| rep2 | 36,718,120 | 29,131,314 | 23,566,250 | |
| rep3 | 36,417,536 | 29,158,596 | 23,333,644 | |
| NS (T) | rep1 | 33,581,112 | 27,099,350 | 22,090,390 |
| rep2 | 34,283,634 | 27,316,198 | 22,119,944 | |
| rep3 | 37,757,450 | 30,506,432 | 23,567,262 | |
| MS (N) | rep1 | 38,883,482 | 30,185,406 | 26,480,438 |
| rep2 | 30,302,292 | 23,917,022 | 20,556,194 | |
| rep3 | 32,049,156 | 25,433,864 | 21,541,656 | |
| MS (T) | rep1 | 38,463,596 | 33,257,728 | 28,917,210 |
| rep2 | 36,832,066 | 31,746,908 | 27,596,414 | |
| rep3 | 35,566,136 | 30,776,962 | 26,170,864 | |
| KR (N) | rep1 | 35,392,952 | 30,615,400 | 25,700,126 |
| rep2 | 37,300,282 | 29,893,988 | 21,960,964 | |
| rep3 | 35,562,908 | 28,725,344 | 23,160,986 | |
| KR (T) | rep1 | 34,926,706 | 28,174,146 | 22,975,134 |
| rep2 | 32,963,336 | 28,548,450 | 23,747,834 | |
| rep3 | 32,474,320 | 28,474,746 | 22,322,760 | |
a) (N) means without acetamiprid treatment, and (T) means with acetamiprid treatment (0.08 ppm and 0.5 ppm for the susceptible and resistant clone, respectively). b) The number of raw reads, filtered reads, and reads mapped to the reference transcript sequences are shown for three biological replicates (rep1, rep2, and rep3) of each clone treated without or with acetamiprid.